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Lj0g3v0115319.2

Overview

Field Value
Gene ID Lj0g3v0115319
Transcript ID Lj0g3v0115319.2
Related isoforms 3
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: TSL-kinase interacting protein 1-like [Glycine max] gi|356559298|ref|XP_003547937.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 3 122 120 0
PANTHER 3 122 120 0
SUPERFAMILY 44 101 58 6.03E-11
ProSiteProfiles 50 101 52 12.428
Gene3D 50 99 50 1.70E-05
SMART 51 99 49 9.70E-07
Pfam 54 96 43 3.50E-06
PANTHER 231 288 58 0
PANTHER 231 288 58 0
PANTHER 306 510 205 0
PANTHER 306 510 205 0
PANTHER 535 777 243 0
PANTHER 535 777 243 0

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

Expression data

Expression pattern

Expression pattern of Lj0g3v0115319.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0115319.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.