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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0116069 |
| Transcript ID | Lj0g3v0116069.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Theobroma cacao] gi|508710299|gb|EOY02196.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 80 | 80 | – | – | |
| PANTHER | 7 | 536 | 530 | 0 | ||
| PANTHER | 7 | 536 | 530 | 0 | – | |
| Pfam | 44 | 108 | 65 | 1.80E-20 | ||
| SUPERFAMILY | 54 | 143 | 90 | 2.22E-24 | – | |
| TIGRFAM | 57 | 536 | 480 | 5.50E-172 | ||
| Phobius | 81 | 97 | 17 | – | – | |
| TMHMM | 84 | 98 | 15 | – | – | |
| Gene3D | 84 | 213 | 130 | 2.00E-31 | ||
| Phobius | 98 | 102 | 5 | – | – | |
| Phobius | 103 | 121 | 19 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 122 | 303 | 182 | – | – | |
| SUPERFAMILY | 144 | 211 | 68 | 5.49E-15 | – | |
| Pfam | 155 | 383 | 229 | 6.30E-07 | ||
| SUPERFAMILY | 246 | 285 | 40 | 5.49E-15 | – | |
| Gene3D | 251 | 287 | 37 | 2.00E-31 | ||
| SUPERFAMILY | 288 | 331 | 44 | 2.22E-24 | – | |
| TMHMM | 304 | 326 | 23 | – | – | |
| Phobius | 304 | 325 | 22 | – | – | |
| Phobius | 326 | 354 | 29 | – | – | |
| Phobius | 355 | 380 | 26 | – | – | |
| TMHMM | 358 | 380 | 23 | – | – | |
| SUPERFAMILY | 360 | 420 | 61 | 2.22E-24 | – | |
| Phobius | 381 | 536 | 156 | – | – | |
| SUPERFAMILY | 414 | 455 | 42 | 7.88E-05 | ||
| Gene3D | 416 | 463 | 48 | 5.10E-12 | ||
| ProSitePatterns | 428 | 434 | 7 | – | ||
| MobiDBLite | 472 | 492 | 21 | – | – | |
| Gene3D | 517 | 535 | 19 | 5.10E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj0g3v0116069.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0116069.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.