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Lj0g3v0116649.1

Overview

Field Value
Gene ID Lj0g3v0116649
Transcript ID Lj0g3v0116649.1
Lotus japonicus genome version MG20 v3.0
Description 21 kDa seed protein [Medicago truncatula] gi|357499767|ref|XP_003620172.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 19 19
Phobius 20 36 17
Phobius 37 47 11
PANTHER 44 243 200 9.70E-77
Phobius 48 66 19
TMHMM 48 67 20
Gene3D 66 243 178 1.10E-57
SUPERFAMILY 66 242 177 6.35E-47
Phobius 67 243 177
SMART 69 243 175 1.30E-55
CDD 69 242 174 3.56E-55
PRINTS 69 98 30 1.40E-15
Pfam 70 242 173 2.70E-46
PRINTS 107 127 21 1.40E-15
PRINTS 188 207 20 1.40E-15

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Endopeptidase inhibitor activity Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides.

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj0g3v0116649.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0116649.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.