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Lj0g3v0121629.1

Overview

Field Value
Gene ID Lj0g3v0121629
Transcript ID Lj0g3v0121629.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor bHLH66-like [Cicer arietinum] gi|502149955|ref|XP_004507723.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR16223:SF28
19 239 221 1.90E-103 –
PANTHER
PTHR16223
19 239 221 1.90E-103 –
MobiDBLite
mobidb-lite
116 174 59 – –
CDD
cd00083
167 223 57 1.38E-13 –
SUPERFAMILY
SSF47459
167 229 63 4.06E-17
IPR011598
ProSiteProfiles
PS50888
169 218 50 17.39
IPR011598
Gene3D
G3DSA:4.10.280.10
171 228 58 1.90E-16
IPR011598
Pfam
PF00010
174 219 46 2.30E-09
IPR011598
SMART
SM00353
175 224 50 1.20E-13
IPR011598
MobiDBLite
mobidb-lite
248 275 28 – –
PANTHER
PTHR16223:SF28
266 350 85 1.90E-103 –
PANTHER
PTHR16223
266 350 85 1.90E-103 –
MobiDBLite
mobidb-lite
334 364 31 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj0g3v0121629.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0121629.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.