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Lj0g3v0131909.1

Overview

Field Value
Gene ID Lj0g3v0131909
Transcript ID Lj0g3v0131909.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor bHLH130-like [Glycine max] gi|356500459|ref|XP_003519049.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
82 108 27 – –
PANTHER
PTHR16223
112 367 256 1.20E-133 –
PANTHER
PTHR16223:SF29
112 367 256 1.20E-133 –
MobiDBLite
mobidb-lite
193 220 28 – –
ProSiteProfiles
PS50888
292 342 51 14.646
IPR011598
SUPERFAMILY
SSF47459
295 358 64 1.23E-15
IPR011598
CDD
cd00083
296 345 50 2.89E-11 –
Gene3D
G3DSA:4.10.280.10
297 355 59 2.30E-14
IPR011598
SMART
SM00353
298 348 51 1.60E-10
IPR011598
Pfam
PF00010
298 343 46 2.30E-09
IPR011598

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj0g3v0131909.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0131909.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.