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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0139159 |
| Transcript ID | Lj0g3v0139159.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peroxidase 52-like isoform 1 [Glycine max] gi|356509058|ref|XP_003523269.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| PANTHER | 1 | 72 | 72 | 5.30E-36 | – | |
| PANTHER | 1 | 72 | 72 | 5.30E-36 | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 9 | 20 | 12 | – | – | |
| SUPERFAMILY | 11 | 71 | 61 | 2.57E-14 | ||
| Phobius | 21 | 25 | 5 | – | – | |
| Phobius | 26 | 72 | 47 | – | – | |
| ProSiteProfiles | 26 | 72 | 47 | 13.518 | ||
| Gene3D | 27 | 72 | 46 | 2.20E-15 | – | |
| PRINTS | 36 | 55 | 20 | 4.10E-08 | ||
| Pfam | 43 | 71 | 29 | 4.60E-05 | ||
| ProSitePatterns | 58 | 69 | 12 | – | ||
| PRINTS | 60 | 72 | 13 | 4.10E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0139159.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0139159.1, powered by CORGI.
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