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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0153219 |
| Transcript ID | Lj0g3v0153219.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transport protein 10-like, partial [Cicer arietinum] gi|502171509|ref|XP_004515049.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 10 | 501 | 492 | 0 | – | |
| PANTHER | 10 | 501 | 492 | 0 | – | |
| TIGRFAM | 19 | 485 | 467 | 8.40E-119 | ||
| Phobius | 21 | 41 | 21 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| SUPERFAMILY | 23 | 486 | 464 | 9.55E-58 | ||
| ProSiteProfiles | 28 | 478 | 451 | 44.13 | ||
| Pfam | 29 | 489 | 461 | 9.30E-128 | ||
| PRINTS | 36 | 46 | 11 | 9.80E-27 | ||
| Phobius | 42 | 83 | 42 | – | – | |
| Gene3D | 44 | 233 | 190 | 1.60E-23 | – | |
| CDD | 80 | 475 | 396 | 1.57E-21 | ||
| Phobius | 84 | 103 | 20 | – | – | |
| TMHMM | 85 | 104 | 20 | – | – | |
| Phobius | 104 | 114 | 11 | – | – | |
| Phobius | 115 | 133 | 19 | – | – | |
| TMHMM | 117 | 136 | 20 | – | – | |
| Phobius | 134 | 138 | 5 | – | – | |
| Phobius | 139 | 161 | 23 | – | – | |
| PRINTS | 140 | 159 | 20 | 9.80E-27 | ||
| TMHMM | 140 | 162 | 23 | – | – | |
| ProSitePatterns | 145 | 170 | 26 | – | ||
| Phobius | 162 | 172 | 11 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 173 | 192 | 20 | – | – | |
| Phobius | 193 | 203 | 11 | – | – | |
| TMHMM | 201 | 223 | 23 | – | – | |
| Phobius | 204 | 223 | 20 | – | – | |
| Phobius | 224 | 284 | 61 | – | – | |
| Gene3D | 283 | 481 | 199 | 3.40E-13 | – | |
| Phobius | 285 | 309 | 25 | – | – | |
| TMHMM | 285 | 307 | 23 | – | – | |
| PRINTS | 295 | 305 | 11 | 9.80E-27 | ||
| Phobius | 310 | 320 | 11 | – | – | |
| Phobius | 321 | 343 | 23 | – | – | |
| TMHMM | 322 | 343 | 22 | – | – | |
| ProSitePatterns | 339 | 356 | 18 | – | ||
| Phobius | 344 | 349 | 6 | – | – | |
| TMHMM | 350 | 372 | 23 | – | – | |
| Phobius | 350 | 375 | 26 | – | – | |
| Phobius | 376 | 386 | 11 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 387 | 406 | 20 | – | – | |
| PRINTS | 391 | 412 | 22 | 9.80E-27 | ||
| Phobius | 407 | 426 | 20 | – | – | |
| PRINTS | 414 | 426 | 13 | 9.80E-27 | ||
| Phobius | 427 | 447 | 21 | – | – | |
| TMHMM | 429 | 448 | 20 | – | – | |
| Phobius | 448 | 452 | 5 | – | – | |
| Phobius | 453 | 474 | 22 | – | – | |
| TMHMM | 453 | 475 | 23 | – | – | |
| Phobius | 475 | 502 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0153219.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0153219.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.