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Lj0g3v0162119.1

Overview

Field Value
Gene ID Lj0g3v0162119
Transcript ID Lj0g3v0162119.1
Lotus japonicus genome version MG20 v3.0
Description Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein isoform 1 [Theobroma cacao] gi|508708200|gb|EOY00097.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 22 22
PANTHER 14 76 63 7.20E-235
PANTHER 14 76 63 7.20E-235
TMHMM 21 43 23
Phobius 23 47 25
Phobius 48 401 354
PANTHER 99 401 303 7.20E-235
PANTHER 99 401 303 7.20E-235
Pfam 134 361 228 1.10E-77

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Expression data

Expression pattern

Expression pattern of Lj0g3v0162119.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0162119.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.