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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0181129 |
| Transcript ID | Lj0g3v0181129.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cation/H(+) antiporter 4-like [Cicer arietinum] gi|502141064|ref|XP_004504433.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| PANTHER | 1 | 730 | 730 | 0 | – | |
| PANTHER | 1 | 730 | 730 | 0 | – | |
| Phobius | 7 | 26 | 20 | – | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| Pfam | 16 | 396 | 381 | 1.40E-30 | ||
| Phobius | 27 | 68 | 42 | – | – | |
| TMHMM | 68 | 87 | 20 | – | – | |
| Phobius | 69 | 88 | 20 | – | – | |
| Phobius | 89 | 99 | 11 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| Phobius | 100 | 122 | 23 | – | – | |
| Phobius | 123 | 133 | 11 | – | – | |
| Phobius | 134 | 154 | 21 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 155 | 165 | 11 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| Phobius | 166 | 188 | 23 | – | – | |
| Phobius | 189 | 199 | 11 | – | – | |
| TMHMM | 198 | 215 | 18 | – | – | |
| Phobius | 200 | 224 | 25 | – | – | |
| Phobius | 225 | 235 | 11 | – | – | |
| TMHMM | 236 | 253 | 18 | – | – | |
| Phobius | 236 | 253 | 18 | – | – | |
| Phobius | 254 | 258 | 5 | – | – | |
| Phobius | 259 | 281 | 23 | – | – | |
| Phobius | 282 | 289 | 8 | – | – | |
| Phobius | 290 | 311 | 22 | – | – | |
| Phobius | 312 | 316 | 5 | – | – | |
| TMHMM | 313 | 335 | 23 | – | – | |
| Phobius | 317 | 340 | 24 | – | – | |
| Phobius | 341 | 346 | 6 | – | – | |
| Phobius | 347 | 366 | 20 | – | – | |
| TMHMM | 347 | 369 | 23 | – | – | |
| Phobius | 367 | 377 | 11 | – | – | |
| Phobius | 378 | 397 | 20 | – | – | |
| TMHMM | 379 | 401 | 23 | – | – | |
| Phobius | 398 | 734 | 337 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0181129.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0181129.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.