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Lj0g3v0191079.1

Overview

Field Value
Gene ID Lj0g3v0191079
Transcript ID Lj0g3v0191079.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: peroxidase 5-like [Cicer arietinum] gi|502117605|ref|XP_004495876.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 22 22
Phobius 1 9 9
ProSiteProfiles 1 20 20 5
PRINTS 6 26 21 9.10E-40
Phobius 10 17 8
SUPERFAMILY 15 266 252 1.62E-80
ProSiteProfiles 15 266 252 57.815
Pfam 15 238 224 2.00E-65
CDD 15 266 252 1.69E-128
Phobius 18 22 5
PANTHER 18 266 249 2.90E-159
Gene3D 18 124 107 4.10E-26
Phobius 23 266 244
PRINTS 46 59 14 9.10E-40
PRINTS 65 75 11 9.10E-40
PRINTS 66 83 18 3.30E-19
PRINTS 84 99 16 9.10E-40
PRINTS 84 96 13 3.30E-19
Gene3D 125 255 131 4.60E-45
PRINTS 131 143 13 9.10E-40
PRINTS 132 147 16 3.30E-19
ProSitePatterns 132 142 11
PRINTS 194 209 16 9.10E-40
PRINTS 196 211 16 3.30E-19
PRINTS 210 227 18 9.10E-40
PRINTS 250 263 14 9.10E-40

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Peroxidase activity Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
Biological process Response to oxidative stress Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Biological process Hydrogen peroxide catabolic process The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2).
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj0g3v0191079.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0191079.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.