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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0192349 |
| Transcript ID | Lj0g3v0192349.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: elongation of fatty acids protein A-like [Cicer arietinum] gi|502153157|ref|XP_004509237.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 77 | 77 | – | – | |
| MobiDBLite | 22 | 56 | 35 | – | – | |
| Phobius | 78 | 97 | 20 | – | – | |
| Pfam | 86 | 254 | 169 | 1.40E-27 | ||
| PANTHER | 87 | 255 | 169 | 8.40E-106 | ||
| PANTHER | 87 | 255 | 169 | 8.40E-106 | – | |
| Phobius | 98 | 108 | 11 | – | – | |
| SUPERFAMILY | 105 | 132 | 28 | 6.02E-05 | – | |
| Phobius | 109 | 127 | 19 | – | – | |
| Phobius | 128 | 133 | 6 | – | – | |
| Phobius | 134 | 151 | 18 | – | – | |
| Phobius | 152 | 156 | 5 | – | – | |
| TMHMM | 155 | 177 | 23 | – | – | |
| Phobius | 157 | 175 | 19 | – | – | |
| Phobius | 176 | 195 | 20 | – | – | |
| TMHMM | 190 | 212 | 23 | – | – | |
| Phobius | 196 | 216 | 21 | – | – | |
| Phobius | 217 | 221 | 5 | – | – | |
| TMHMM | 222 | 244 | 23 | – | – | |
| Phobius | 222 | 245 | 24 | – | – | |
| Phobius | 246 | 259 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0192349.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0192349.1, powered by CORGI.
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