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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0198949 |
| Transcript ID | Lj0g3v0198949.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: symplekin-like isoform X1 [Cicer arietinum] gi|502131681|ref|XP_004501065.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 344 | 344 | 0 | ||
| PANTHER | 1 | 344 | 344 | 0 | – | |
| SUPERFAMILY | 5 | 118 | 114 | 1.15E-09 | ||
| Gene3D | 5 | 112 | 108 | 4.90E-06 | ||
| Pfam | 98 | 320 | 223 | 2.60E-47 | ||
| SUPERFAMILY | 213 | 266 | 54 | 1.15E-09 | ||
| MobiDBLite | 330 | 384 | 55 | – | – | |
| PANTHER | 360 | 678 | 319 | 0 | – | |
| PANTHER | 360 | 678 | 319 | 0 | ||
| MobiDBLite | 519 | 629 | 111 | – | – | |
| MobiDBLite | 665 | 685 | 21 | – | – | |
| PANTHER | 706 | 1327 | 622 | 0 | ||
| PANTHER | 706 | 1327 | 622 | 0 | – | |
| SUPERFAMILY | 851 | 940 | 90 | 1.15E-09 | ||
| MobiDBLite | 952 | 982 | 31 | – | – | |
| SUPERFAMILY | 1011 | 1237 | 227 | 1.15E-09 | ||
| Pfam | 1101 | 1279 | 179 | 4.40E-61 | ||
| MobiDBLite | 1319 | 1339 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0198949.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0198949.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.