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IPR032460 is a Symplekin/Pta1, N-terminal.
<p>This domain can be found in the symplekin protein from animals and Pta1 protein from budding yeasts. This domain is typically between 239 to 261 amino acids in length.</p> <p>Symplekin is a scaffold protein that functions as a component of a multimolecular complex involved in histone mRNA 3'-end processing [[cite:PUB00068954], [cite:PUB00068955]].</p> <p>Pta1 is involved in pre-tRNA processing. Pta1 is a subunit of the cleavage and polyadenylation factor (CPF), which plays a key role in polyadenylation-dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB [[cite:PUB00070276]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: symplekin-like isoform X1 [Cicer arietinum] gi|502131681|ref|XP_004501065.1| | 12 | ||
| – | PREDICTED: symplekin-like isoform X1 [Cicer arietinum] gi|502147349|ref|XP_004506749.1| | 9 | ||
| – | PREDICTED: symplekin-like isoform X1 [Cicer arietinum] gi|502147349|ref|XP_004506749.1| | 9 | ||
| – | PREDICTED: symplekin-like isoform X1 [Cicer arietinum] gi|502147349|ref|XP_004506749.1| | 9 | ||
| – | PREDICTED: symplekin-like isoform X1 [Cicer arietinum] gi|502147349|ref|XP_004506749.1| | 9 | ||
| – | PREDICTED: symplekin-like isoform X1 [Cicer arietinum] gi|502131681|ref|XP_004501065.1| | 13 | ||
| – | PREDICTED: symplekin-like [Glycine max] gi|356507969|ref|XP_003522735.1| | 8 | ||
| – | Symplekin; TAIR: AT1G27595.1 symplekin; Swiss-Prot: sp|Q92797|SYMPK_HUMAN Symplekin; TrEMBL-Plants: tr|A0A072VD61|A0A072VD61_MEDTR Symplekin tight junction protein carboxy-terminal protein; Found in the gene: LotjaGi1g1v0413400 | 11 | ||
| – | Symplekin; TAIR: AT5G01400.3 HEAT repeat-containing protein; Swiss-Prot: sp|Q92797|SYMPK_HUMAN Symplekin; TrEMBL-Plants: tr|A0A0B2SBL5|A0A0B2SBL5_GLYSO Symplekin; Found in the gene: LotjaGi3g1v0208700 | 14 | ||
| – | Symplekin; TAIR: AT5G01400.3 HEAT repeat-containing protein; Swiss-Prot: sp|Q92797|SYMPK_HUMAN Symplekin; TrEMBL-Plants: tr|A0A0B2SBL5|A0A0B2SBL5_GLYSO Symplekin; Found in the gene: LotjaGi3g1v0208700 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 10.00 |