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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0200139 |
| Transcript ID | Lj0g3v0200139.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | F-box/LRR-repeat protein [Medicago truncatula] gi|357468013|ref|XP_003604291.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 51 | 51 | 8.517 | ||
| PANTHER | 1 | 109 | 109 | 9.50E-69 | – | |
| PANTHER | 1 | 109 | 109 | 9.50E-69 | – | |
| Gene3D | 4 | 228 | 225 | 3.40E-23 | ||
| Pfam | 4 | 46 | 43 | 1.80E-04 | ||
| SUPERFAMILY | 17 | 225 | 209 | 1.73E-12 | – | |
| SMART | 88 | 113 | 26 | 270 | ||
| PANTHER | 139 | 229 | 91 | 9.50E-69 | – | |
| PANTHER | 139 | 229 | 91 | 9.50E-69 | – | |
| SMART | 168 | 193 | 26 | 0.0079 | ||
| Gene3D | 249 | 546 | 298 | 1.60E-34 | ||
| SUPERFAMILY | 250 | 364 | 115 | 1.81E-31 | – | |
| SMART | 256 | 280 | 25 | 120 | ||
| PANTHER | 256 | 376 | 121 | 9.50E-69 | – | |
| PANTHER | 256 | 376 | 121 | 9.50E-69 | – | |
| SMART | 310 | 335 | 26 | 110 | ||
| SMART | 336 | 361 | 26 | 1.9 | ||
| SUPERFAMILY | 395 | 539 | 145 | 1.81E-31 | – | |
| PANTHER | 408 | 458 | 51 | 9.50E-69 | – | |
| PANTHER | 408 | 458 | 51 | 9.50E-69 | – | |
| SMART | 418 | 443 | 26 | 33 | ||
| SMART | 466 | 490 | 25 | 150 | ||
| PANTHER | 481 | 528 | 48 | 9.50E-69 | – | |
| PANTHER | 481 | 528 | 48 | 9.50E-69 | – | |
| SMART | 491 | 516 | 26 | 130 | ||
| SMART | 517 | 545 | 29 | 57 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0200139.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0200139.1, powered by CORGI.
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