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Lj0g3v0202739.1

Overview

Field Value
Gene ID Lj0g3v0202739
Transcript ID Lj0g3v0202739.1
Lotus japonicus genome version MG20 v3.0
Description phosphoenolpyruvate-carboxylase kinase [Glycine max] gi|351725931|ref|NP_001238645.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF000654
4 254 251 7.00E-22 –
Gene3D
G3DSA:3.30.200.20
8 118 111 1.40E-35 –
PANTHER
PTHR24349:SF76
10 255 246 3.40E-152 –
PANTHER
PTHR24349
10 255 246 3.40E-152 –
SUPERFAMILY
SSF56112
11 255 245 3.37E-83
IPR011009
CDD
cd05117
12 255 244 2.53E-109 –
ProSiteProfiles
PS50011
13 255 243 47.594
IPR000719
Pfam
PF00069
13 255 243 7.60E-68
IPR000719
SMART
SM00220
13 255 243 8.50E-76
IPR000719
ProSitePatterns
PS00107
19 42 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
119 255 137 5.10E-56 –
ProSitePatterns
PS00108
129 141 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj0g3v0202739.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0202739.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.