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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0202929 |
| Transcript ID | Lj0g3v0202929.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356544808|ref|XP_003540839.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 33 | 33 | – | – | |
| Phobius | 1 | 57 | 57 | – | – | |
| PANTHER | 28 | 339 | 312 | 2.30E-228 | – | |
| PANTHER | 28 | 339 | 312 | 2.30E-228 | – | |
| CDD | 55 | 339 | 285 | 2.35E-105 | – | |
| TMHMM | 58 | 80 | 23 | – | – | |
| Phobius | 58 | 76 | 19 | – | – | |
| Pfam | 65 | 225 | 161 | 4.80E-33 | ||
| TIGRFAM | 65 | 339 | 275 | 8.40E-55 | ||
| Phobius | 77 | 141 | 65 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| TMHMM | 142 | 164 | 23 | – | – | |
| Phobius | 142 | 165 | 24 | – | – | |
| Phobius | 166 | 170 | 5 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 171 | 192 | 22 | – | – | |
| Phobius | 193 | 203 | 11 | – | – | |
| TMHMM | 203 | 225 | 23 | – | – | |
| Phobius | 204 | 226 | 23 | – | – | |
| Phobius | 227 | 231 | 5 | – | – | |
| Phobius | 232 | 256 | 25 | – | – | |
| TMHMM | 235 | 257 | 23 | – | – | |
| Phobius | 257 | 287 | 31 | – | – | |
| TMHMM | 285 | 307 | 23 | – | – | |
| Phobius | 288 | 308 | 21 | – | – | |
| Phobius | 309 | 319 | 11 | – | – | |
| TMHMM | 317 | 339 | 23 | – | – | |
| Phobius | 320 | 339 | 20 | – | – | |
| Phobius | 340 | 340 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0202929.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0202929.1, powered by CORGI.
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