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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0206989 |
| Transcript ID | Lj0g3v0206989.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer arietinum] gi|502156666|ref|XP_004510587.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 486 | 486 | 1.50E-281 | ||
| Pfam | 1 | 266 | 266 | 6.10E-25 | ||
| SUPERFAMILY | 1 | 486 | 486 | 3.97E-115 | – | |
| PANTHER | 1 | 486 | 486 | 1.50E-281 | – | |
| Gene3D | 21 | 49 | 29 | 3.80E-44 | – | |
| Pfam | 51 | 230 | 180 | 1.10E-18 | ||
| Gene3D | 52 | 219 | 168 | 3.00E-40 | ||
| Gene3D | 220 | 383 | 164 | 3.80E-44 | – | |
| Pfam | 308 | 372 | 65 | 5.00E-19 | ||
| Pfam | 409 | 468 | 60 | 7.20E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-directed 5'-3' RNA polymerase activity | Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Molecular function | Ribonucleoside binding | Interacting selectively and non-covalently with a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose. |
Expression pattern of Lj0g3v0206989.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0206989.2, powered by CORGI.
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