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SSF64484

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 66

Transcript Name Description Predicted domains Domain count
Lj0g3v0053869.1
– RNA polymerase beta'' subunit [Lotus japonicus] gi|13518438|ref|NP_084798.1|
Domains
6
Lj0g3v0053889.1
– RNA polymerase beta'' subunit [Lotus japonicus] gi|13518438|ref|NP_084798.1|
Domains
11
Lj0g3v0053899.1
– RNA polymerase beta subunit [Lotus japonicus] gi|13518436|ref|NP_084796.1|
Domains
16
Lj0g3v0053909.1
– RNA polymerase beta subunit [Lotus japonicus] gi|13518436|ref|NP_084796.1|
Domains
12
Lj0g3v0062869.1
– DNA-directed RNA polymerase III subunit RPC2 [Medicago truncatula] gi|357514369|ref|XP_003627473.1|
Domains
6
Lj0g3v0092909.1
– PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer arietinum] gi|502158103|ref|XP_004511031.1|
Domains
15
Lj0g3v0092909.2
– PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer arietinum] gi|502158103|ref|XP_004511031.1|
Domains
11
Lj0g3v0103829.1
– PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer arietinum] gi|502158103|ref|XP_004511031.1|
Domains
5
Lj0g3v0163029.1
– PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max] gi|356555019|ref|XP_003545837.1|
Domains
5
Lj0g3v0167619.1
– PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine max] gi|356520824|ref|XP_003529060.1|
Domains
11
Lj0g3v0206979.1
– DNA-directed RNA polymerase III subunit RPC2 [Medicago truncatula] gi|357514369|ref|XP_003627473.1|
Domains
6
Lj0g3v0206989.2
– PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer arietinum] gi|502156666|ref|XP_004510587.1|
Domains
14
Lj0g3v0236409.1
– PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer arietinum] gi|502158103|ref|XP_004511031.1|
Domains
10
Lj0g3v0353539.1
– PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine max] gi|356563684|ref|XP_003550091.1|
Domains
8
Lj0g3v0353539.2
– PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine max] gi|356563684|ref|XP_003550091.1|
Domains
7
Lj0g3v0353889.1
– PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max] gi|356546354|ref|XP_003541591.1|
Domains
5
Lj0g3v0353889.2
– PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max] gi|356546354|ref|XP_003541591.1|
Domains
5
Lj1g3v1815480.1
– DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|357466021|ref|XP_003603295.1|
Domains
14
Lj1g3v1815490.1
– PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer arietinum] gi|502132489|ref|XP_004501385.1|
Domains
12
Lj2g3v1020050.1
– PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis vinifera] gi|225464023|ref|XP_002265454.1|
Domains
7
Lj2g3v1648020.1
– PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer arietinum] gi|502161489|ref|XP_004512182.1|
Domains
12
Lj2g3v1648030.1
– RNA polymerase II largest subunit [Rhododendron macrophyllum] gi|68300797|gb|AAY89341.1|
Domains
5
Lj2g3v1648040.1
– PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer arietinum] gi|502161489|ref|XP_004512182.1|
Domains
15
Lj2g3v1659630.1
– PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer arietinum] gi|502161489|ref|XP_004512182.1|
Domains
29
Lj3g3v0965630.1
– DNA-directed RNA polymerase III subunit RPC2 [Medicago truncatula] gi|357514369|ref|XP_003627473.1|
Domains
9
Lj3g3v0965640.1
– PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer arietinum] gi|502156666|ref|XP_004510587.1|
Domains
6
Lj3g3v1906470.1
– PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine max] gi|356548837|ref|XP_003542805.1|
Domains
23
Lj4g3v1263390.1
– DNA-directed RNA polymerase III subunit RPC2 [Medicago truncatula] gi|357514369|ref|XP_003627473.1|
Domains
6
Lj5g3v2169590.1
– PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine max] gi|356520824|ref|XP_003529060.1|
Domains
8
Lj6g3v2041910.1
– PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine max] gi|356530409|ref|XP_003533774.1|
Domains
19
Ljchlorog3v0000370.1
– RNA polymerase beta subunit [Lotus japonicus] gi|13518436|ref|NP_084796.1|
Domains
12
Ljchlorog3v0000380.1
– RNA polymerase beta subunit [Lotus japonicus] gi|13518436|ref|NP_084796.1|
Domains
16
LotjaGi1g1v0377700.1
– DNA-directed RNA polymerase subunit beta; TAIR: AT3G23780.1 nuclear RNA polymerase D2A; Swiss-Prot: sp|Q9LK40|NRPD2_ARATH DNA-directed RNA polymerases IV and V subunit 2; TrEMBL-Plants: tr|A0A0B2RBE2|A0A0B2RBE2_GLYSO DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi1g1v0377700
Domains
29
LotjaGi1g1v0377700.2
– DNA-directed RNA polymerase subunit beta; TAIR: AT3G23780.1 nuclear RNA polymerase D2A; Swiss-Prot: sp|Q9LK40|NRPD2_ARATH DNA-directed RNA polymerases IV and V subunit 2; TrEMBL-Plants: tr|G7J9U6|G7J9U6_MEDTR DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi1g1v0377700
Domains
11
LotjaGi1g1v0634400.1
– DNA-directed RNA polymerase subunit; TAIR: AT5G60040.1 nuclear RNA polymerase C1; Swiss-Prot: sp|F4JXF9|NRPC1_ARATH DNA-directed RNA polymerase III subunit 1; TrEMBL-Plants: tr|I1LK95|I1LK95_SOYBN DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi1g1v0634400
Domains
29
LotjaGi1g1v0660100_LC.1
– DNA-directed RNA polymerase subunit beta''; TAIR: ATCG00170.1 DNA-directed RNA polymerase family protein (ChrC); Swiss-Prot: sp|Q9BBS7|RPOC2_LOTJA DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|A0A1C7D3H4|A0A1C7D3H4_9FABA DNA-directed RNA polymerase subunit beta''; Found in the gene: LotjaGi1g1v0660100_LC
Domains
4
LotjaGi1g1v0660200_LC.1
– DNA-directed RNA polymerase subunit beta''; TAIR: ATCG00170.1 DNA-directed RNA polymerase family protein (ChrC); Swiss-Prot: sp|Q9BBS7|RPOC2_LOTJA DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|A0A023IN53|A0A023IN53_LENCU RNA polymerase beta' subunit; Found in the gene: LotjaGi1g1v0660200_LC
Domains
9
LotjaGi1g1v0660200_LC.3
– DNA-directed RNA polymerase subunit beta''; TAIR: ATCG00170.1 DNA-directed RNA polymerase family protein (ChrC); Swiss-Prot: sp|Q9BBS7|RPOC2_LOTJA DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|A0A0K0LU53|A0A0K0LU53_9FABA DNA-directed RNA polymerase subunit beta''; Found in the gene: LotjaGi1g1v0660200_LC
Domains
9
LotjaGi1g1v0660200_LC.5
– DNA-directed RNA polymerase subunit beta''; TAIR: ATCG00170.1 DNA-directed RNA polymerase family protein (ChrC); Swiss-Prot: sp|Q9BBS7|RPOC2_LOTJA DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|A0A0K0LU53|A0A0K0LU53_9FABA DNA-directed RNA polymerase subunit beta''; Found in the gene: LotjaGi1g1v0660200_LC
Domains
7
LotjaGi2g1v0377500.1
– DNA-directed RNA polymerase subunit; TAIR: AT4G35800.1 RNA polymerase II large subunit; Swiss-Prot: sp|P18616|NRPB1_ARATH DNA-directed RNA polymerase II subunit 1; TrEMBL-Plants: tr|V7CLS7|V7CLS7_PHAVU DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0377500
Domains
38
LotjaGi2g1v0377500.2
– DNA-directed RNA polymerase subunit; TAIR: AT4G35800.1 RNA polymerase II large subunit; Swiss-Prot: sp|P18616|NRPB1_ARATH DNA-directed RNA polymerase II subunit 1; TrEMBL-Plants: tr|V7CLS7|V7CLS7_PHAVU DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0377500
Domains
38
LotjaGi2g1v0377500.3
– DNA-directed RNA polymerase subunit; TAIR: AT4G35800.1 RNA polymerase II large subunit; Swiss-Prot: sp|P18616|NRPB1_ARATH DNA-directed RNA polymerase II subunit 1; TrEMBL-Plants: tr|V7CLS7|V7CLS7_PHAVU DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0377500
Domains
38
LotjaGi2g1v0377500.4
– DNA-directed RNA polymerase subunit; TAIR: AT4G35800.1 RNA polymerase II large subunit; Swiss-Prot: sp|P18616|NRPB1_ARATH DNA-directed RNA polymerase II subunit 1; TrEMBL-Plants: tr|V7CLS7|V7CLS7_PHAVU DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0377500
Domains
38
LotjaGi2g1v0377500.5
– DNA-directed RNA polymerase subunit; TAIR: AT4G35800.1 RNA polymerase II large subunit; Swiss-Prot: sp|P18616|NRPB1_ARATH DNA-directed RNA polymerase II subunit 1; TrEMBL-Plants: tr|V7CLS7|V7CLS7_PHAVU DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0377500
Domains
38
LotjaGi2g1v0391800_LC.1
– DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp|F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr|K7L1D4|K7L1D4_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi2g1v0391800_LC
Domains
12
LotjaGi2g1v0391800_LC.2
– DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp|F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr|K7L1D4|K7L1D4_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi2g1v0391800_LC
Domains
12
LotjaGi2g1v0391800_LC.3
– DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp|F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr|K7L1D4|K7L1D4_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi2g1v0391800_LC
Domains
12
LotjaGi2g1v0430800.1
– DNA-directed RNA polymerase subunit; TAIR: AT1G63020.1 nuclear RNA polymerase D1A; Swiss-Prot: sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1; TrEMBL-Plants: tr|G7KER5|G7KER5_MEDTR DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0430800
Domains
19
LotjaGi2g1v0430800.2
– DNA-directed RNA polymerase subunit; TAIR: AT1G63020.1 nuclear RNA polymerase D1A; Swiss-Prot: sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1; TrEMBL-Plants: tr|G7KER5|G7KER5_MEDTR DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0430800
Domains
24
LotjaGi2g1v0430800.3
– DNA-directed RNA polymerase subunit; TAIR: AT1G63020.1 nuclear RNA polymerase D1A; Swiss-Prot: sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1; TrEMBL-Plants: tr|G7KER5|G7KER5_MEDTR DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0430800
Domains
24
LotjaGi2g1v0430800.4
– DNA-directed RNA polymerase subunit; TAIR: AT1G63020.1 nuclear RNA polymerase D1A; Swiss-Prot: sp|Q9LQ02|NRPD1_ARATH DNA-directed RNA polymerase IV subunit 1; TrEMBL-Plants: tr|G7KER5|G7KER5_MEDTR DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi2g1v0430800
Domains
19
LotjaGi3g1v0300900_LC.1
– DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.3 nuclear RNA polymerase C2; Swiss-Prot: sp|F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr|A0A1J7GZE0|A0A1J7GZE0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0300900_LC
Domains
11
LotjaGi3g1v0300900_LC.2
– DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp|F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr|K7L1D3|K7L1D3_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi3g1v0300900_LC
Domains
26
LotjaGi3g1v0315900.1
– DNA-directed RNA polymerase subunit beta; TAIR: AT1G29940.1 nuclear RNA polymerase A2; Swiss-Prot: sp|F4I366|NRPA2_ARATH DNA-directed RNA polymerase I subunit 2; TrEMBL-Plants: tr|I1M0N3|I1M0N3_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi3g1v0315900
Domains
28
LotjaGi3g1v0315900.2
– DNA-directed RNA polymerase subunit beta; TAIR: AT1G29940.1 nuclear RNA polymerase A2; Swiss-Prot: sp|F4I366|NRPA2_ARATH DNA-directed RNA polymerase I subunit 2; TrEMBL-Plants: tr|A0A0R0GQW5|A0A0R0GQW5_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi3g1v0315900
Domains
28
LotjaGi3g1v0318900.1
– DNA-directed RNA polymerase subunit; TAIR: AT2G40030.1 nuclear RNA polymerase D1B; Swiss-Prot: sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1; TrEMBL-Plants: tr|K7M0Q7|K7M0Q7_SOYBN DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi3g1v0318900
Domains
19
LotjaGi3g1v0318900.2
– DNA-directed RNA polymerase subunit; TAIR: AT2G40030.1 nuclear RNA polymerase D1B; Swiss-Prot: sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1; TrEMBL-Plants: tr|K7M0Q7|K7M0Q7_SOYBN DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi3g1v0318900
Domains
19
LotjaGi3g1v0318900.3
– DNA-directed RNA polymerase subunit; TAIR: AT2G40030.1 nuclear RNA polymerase D1B; Swiss-Prot: sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1; TrEMBL-Plants: tr|G7LG09|G7LG09_MEDTR DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi3g1v0318900
Domains
14
LotjaGi3g1v0318900.4
– DNA-directed RNA polymerase subunit; TAIR: AT2G40030.1 nuclear RNA polymerase D1B; Swiss-Prot: sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1; TrEMBL-Plants: tr|G7LG09|G7LG09_MEDTR DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi3g1v0318900
Domains
16
LotjaGi3g1v0319100.1
– DNA-directed RNA polymerase subunit; TAIR: AT2G40030.1 nuclear RNA polymerase D1B; Swiss-Prot: sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1; TrEMBL-Plants: tr|K7M0Q7|K7M0Q7_SOYBN DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi3g1v0319100
Domains
19
LotjaGi5g1v0143500_LC.1
– DNA-directed RNA polymerase subunit beta; TAIR: ATCG00190.1 RNA polymerase subunit beta (ChrC); Swiss-Prot: sp|Q9BBS9|RPOB_LOTJA DNA-directed RNA polymerase subunit beta; TrEMBL-Plants: tr|A0A1C7D303|A0A1C7D303_9FABA DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi5g1v0143500_LC
Domains
11
LotjaGi5g1v0143500_LC.2
– DNA-directed RNA polymerase subunit beta; TAIR: ATCG00190.1 RNA polymerase subunit beta (ChrC); Swiss-Prot: sp|Q9BBS9|RPOB_LOTJA DNA-directed RNA polymerase subunit beta; TrEMBL-Plants: tr|A0A1C7D4C0|A0A1C7D4C0_ROBPS DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi5g1v0143500_LC
Domains
11
LotjaGi5g1v0143500_LC.3
– DNA-directed RNA polymerase subunit beta; TAIR: ATCG00190.1 RNA polymerase subunit beta (ChrC); Swiss-Prot: sp|Q9BBS9|RPOB_LOTJA DNA-directed RNA polymerase subunit beta; TrEMBL-Plants: tr|A0A0F6NF16|A0A0F6NF16_LATLI DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi5g1v0143500_LC
Domains
8
LotjaGi5g1v0147900.1
– DNA-directed RNA polymerase subunit; TAIR: AT3G57660.1 nuclear RNA polymerase A1; Swiss-Prot: sp|Q9SVY0|NRPA1_ARATH DNA-directed RNA polymerase I subunit 1; TrEMBL-Plants: tr|A0A151QTE2|A0A151QTE2_CAJCA DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi5g1v0147900
Domains
28
LotjaGi5g1v0334100.1
– DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp|F4KD38|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr|K7L1D3|K7L1D3_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi5g1v0334100
Domains
30
LotjaGi6g1v0332200.1
– DNA-directed RNA polymerase subunit beta; TAIR: AT4G21710.1 DNA-directed RNA polymerase family protein; Swiss-Prot: sp|Q42877|RPB2_SOLLC DNA-directed RNA polymerase II subunit RPB2; TrEMBL-Plants: tr|V7BQ99|V7BQ99_PHAVU DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi6g1v0332200
Domains
31

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 1.52