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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0207399 |
| Transcript ID | Lj0g3v0207399.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [Cicer arietinum] gi|502150266|ref|XP_004507870.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 88 | 88 | 5.30E-11 | ||
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 2 | 100 | 99 | 1.40E-47 | – | |
| PANTHER | 2 | 100 | 99 | 1.40E-47 | – | |
| Phobius | 21 | 40 | 20 | – | – | |
| TMHMM | 21 | 40 | 20 | – | – | |
| Phobius | 41 | 45 | 5 | – | – | |
| TMHMM | 45 | 67 | 23 | – | – | |
| Phobius | 46 | 65 | 20 | – | – | |
| Phobius | 66 | 76 | 11 | – | – | |
| Phobius | 77 | 95 | 19 | – | – | |
| TMHMM | 80 | 99 | 20 | – | – | |
| Phobius | 96 | 100 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of Lj0g3v0207399.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0207399.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.