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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0214579 |
| Transcript ID | Lj0g3v0214579.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein GPR107-like [Cicer arietinum] gi|502110573|ref|XP_004493910.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 88 | 88 | – | – | |
| PANTHER | 2 | 350 | 349 | 2.30E-197 | ||
| PANTHER | 2 | 350 | 349 | 2.30E-197 | – | |
| Pfam | 46 | 327 | 282 | 1.00E-48 | ||
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 89 | 109 | 21 | – | – | |
| Phobius | 110 | 117 | 8 | – | – | |
| TMHMM | 115 | 137 | 23 | – | – | |
| Phobius | 118 | 134 | 17 | – | – | |
| Phobius | 135 | 153 | 19 | – | – | |
| Phobius | 154 | 180 | 27 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| Phobius | 181 | 191 | 11 | – | – | |
| TMHMM | 192 | 211 | 20 | – | – | |
| Phobius | 192 | 211 | 20 | – | – | |
| Phobius | 212 | 222 | 11 | – | – | |
| Phobius | 223 | 244 | 22 | – | – | |
| TMHMM | 226 | 248 | 23 | – | – | |
| Phobius | 245 | 271 | 27 | – | – | |
| Phobius | 272 | 294 | 23 | – | – | |
| TMHMM | 272 | 294 | 23 | – | – | |
| Phobius | 295 | 299 | 5 | – | – | |
| Phobius | 300 | 321 | 22 | – | – | |
| TMHMM | 304 | 321 | 18 | – | – | |
| Phobius | 322 | 351 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0214579.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0214579.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.