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Lj0g3v0224609.1

Overview

Field Value
Gene ID Lj0g3v0224609
Transcript ID Lj0g3v0224609.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max] gi|356512948|ref|XP_003525176.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31948:SF8
19 157 139 8.50E-31 –
PANTHER
PTHR31948
19 157 139 8.50E-31 –
Pfam
PF04770
22 73 52 2.10E-18
IPR006456
ProDom
PD125774
22 71 50 2.00E-10
IPR006456
TIGRFAM
TIGR01566
24 71 48 1.00E-16
IPR006456
ProSiteProfiles
PS51523
24 74 51 19.247
IPR006456
Gene3D
G3DSA:1.10.10.60
82 153 72 3.20E-17
IPR009057
SUPERFAMILY
SSF46689
85 151 67 9.21E-13
IPR009057
TIGRFAM
TIGR01565
92 148 57 1.10E-18
IPR006455
CDD
cd00086
93 155 63 0.00296343 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj0g3v0224609.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0224609.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.