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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0235039 |
| Transcript ID | Lj0g3v0235039.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein 5-like [Cicer arietinum] gi|502085081|ref|XP_004487832.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 478 | 478 | 0 | – | |
| PANTHER | 1 | 478 | 478 | 0 | – | |
| CDD | 20 | 450 | 431 | 6.47E-130 | – | |
| Phobius | 27 | 49 | 23 | – | – | |
| TMHMM | 27 | 46 | 20 | – | – | |
| Pfam | 30 | 188 | 159 | 2.00E-31 | ||
| Phobius | 50 | 60 | 11 | – | – | |
| TMHMM | 59 | 81 | 23 | – | – | |
| Phobius | 61 | 82 | 22 | – | – | |
| Phobius | 83 | 101 | 19 | – | – | |
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 102 | 123 | 22 | – | – | |
| Phobius | 124 | 170 | 47 | – | – | |
| TMHMM | 171 | 193 | 23 | – | – | |
| Phobius | 171 | 193 | 23 | – | – | |
| Phobius | 194 | 198 | 5 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 199 | 223 | 25 | – | – | |
| Phobius | 224 | 254 | 31 | – | – | |
| TMHMM | 255 | 274 | 20 | – | – | |
| Phobius | 255 | 274 | 20 | – | – | |
| Phobius | 275 | 288 | 14 | – | – | |
| Phobius | 289 | 307 | 19 | – | – | |
| TMHMM | 289 | 311 | 23 | – | – | |
| Phobius | 308 | 318 | 11 | – | – | |
| TMHMM | 316 | 338 | 23 | – | – | |
| Pfam | 319 | 407 | 89 | 3.90E-11 | ||
| Phobius | 319 | 338 | 20 | – | – | |
| Phobius | 339 | 352 | 14 | – | – | |
| Phobius | 353 | 372 | 20 | – | – | |
| TMHMM | 353 | 370 | 18 | – | – | |
| Phobius | 373 | 392 | 20 | – | – | |
| TMHMM | 391 | 413 | 23 | – | – | |
| Phobius | 393 | 411 | 19 | – | – | |
| Phobius | 412 | 416 | 5 | – | – | |
| Phobius | 417 | 440 | 24 | – | – | |
| TMHMM | 418 | 440 | 23 | – | – | |
| Phobius | 441 | 488 | 48 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0235039.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0235039.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.