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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0239369 |
| Transcript ID | Lj0g3v0239369.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: paired amphipathic helix protein Sin3-like 3-like [Glycine max] gi|356526870|ref|XP_003532039.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 402 | 402 | 0 | – | |
| PANTHER | 1 | 402 | 402 | 0 | – | |
| MobiDBLite | 1 | 35 | 35 | – | – | |
| Gene3D | 32 | 103 | 72 | 2.30E-23 | ||
| SUPERFAMILY | 33 | 103 | 71 | 3.79E-25 | ||
| ProSiteProfiles | 34 | 104 | 71 | 17.915 | ||
| Pfam | 57 | 101 | 45 | 5.70E-17 | ||
| SUPERFAMILY | 116 | 189 | 74 | 2.88E-24 | ||
| Gene3D | 117 | 189 | 73 | 3.10E-27 | ||
| ProSiteProfiles | 120 | 190 | 71 | 18.668 | ||
| Pfam | 144 | 187 | 44 | 4.80E-18 | ||
| MobiDBLite | 219 | 301 | 83 | – | – | |
| Coils | 252 | 272 | 21 | – | – | |
| ProSiteProfiles | 319 | 398 | 80 | 11.572 | ||
| SUPERFAMILY | 333 | 398 | 66 | 1.70E-14 | ||
| Gene3D | 334 | 396 | 63 | 2.70E-13 | ||
| Pfam | 351 | 395 | 45 | 3.20E-08 | ||
| MobiDBLite | 419 | 450 | 32 | – | – | |
| PANTHER | 457 | 770 | 314 | 0 | – | |
| PANTHER | 457 | 770 | 314 | 0 | – | |
| SMART | 486 | 586 | 101 | 2.90E-60 | ||
| Pfam | 488 | 580 | 93 | 4.10E-36 | ||
| Coils | 559 | 579 | 21 | – | – | |
| MobiDBLite | 762 | 813 | 52 | – | – | |
| MobiDBLite | 908 | 986 | 79 | – | – | |
| PANTHER | 970 | 1003 | 34 | 0 | – | |
| PANTHER | 970 | 1003 | 34 | 0 | – | |
| MobiDBLite | 999 | 1048 | 50 | – | – | |
| PANTHER | 1025 | 1048 | 24 | 0 | – | |
| PANTHER | 1025 | 1048 | 24 | 0 | – | |
| Coils | 1043 | 1048 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj0g3v0239369.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0239369.1, powered by CORGI.
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