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PTHR12346

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003714
Molecular function Transcription corepressor activity A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to repress the transcription of specific genes. Corepressors often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class occludes DNA-binding transcription factor protein-protein interaction domains. A third class of corepressors prevents interactions of DNA bound DNA-binding transcription factor with coactivators.
Subterm of

Associated Lotus transcripts 28

Transcript Name Description Predicted domains Domain count
Lj0g3v0093659.1
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1|
Domains
4
Lj0g3v0152569.1
– SIN3 component, histone deacetylase complex [Populus trichocarpa] gi|224100205|ref|XP_002311786.1|
Domains
6
Lj0g3v0228619.1
– PREDICTED: paired amphipathic helix protein Sin3-like 3-like [Glycine max] gi|356526870|ref|XP_003532039.1|
Domains
4
Lj0g3v0239369.1
– PREDICTED: paired amphipathic helix protein Sin3-like 3-like [Glycine max] gi|356526870|ref|XP_003532039.1|
Domains
12
Lj0g3v0246839.1
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1|
Domains
6
Lj0g3v0300039.1
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356500930|ref|XP_003519283.1|
Domains
8
Lj0g3v0300059.1
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1|
Domains
6
Lj0g3v0315769.1
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Cicer arietinum] gi|502182988|ref|XP_004517035.1|
Domains
3
Lj2g3v1022350.1
– PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine max] gi|356550937|ref|XP_003543838.1|
Domains
14
Lj2g3v1022350.2
– PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine max] gi|356573426|ref|XP_003554862.1|
Domains
5
Lj2g3v1022350.3
– PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine max] gi|356550937|ref|XP_003543838.1|
Domains
12
Lj2g3v1365810.1
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1|
Domains
13
Lj2g3v1365810.2
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1|
Domains
13
LotjaGi2g1v0004400_LC.1
– Paired amphipathic helix protein Sin3; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|A0A0B2NVG5|A0A0B2NVG5_GLYSO Paired amphipathic helix protein Sin3-like 4; Found in the gene: LotjaGi2g1v0004400_LC
Domains
10
LotjaGi2g1v0252800.1
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z6|I1N5Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.2
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|V7C1D5|V7C1D5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.3
– Paired amphipathic helix protein Sin3; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z7|I1N5Z7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
10
LotjaGi2g1v0252800.4
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z6|I1N5Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
10
LotjaGi2g1v0252800.5
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z6|I1N5Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.6
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|A0A0B2PVE5|A0A0B2PVE5_GLYSO Paired amphipathic helix protein Sin3-like 2; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.7
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z7|I1N5Z7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.8
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|K7LXD7|K7LXD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.9
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z7|I1N5Z7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0312500.1
– Paired amphipathic helix SIN3-like protein; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|A0A0S3T2A7|A0A0S3T2A7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312500
Domains
15
LotjaGi2g1v0312500.2
– Paired amphipathic helix SIN3-like protein; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|A0A0S3T2A7|A0A0S3T2A7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312500
Domains
15
LotjaGi2g1v0312500.3
– Paired amphipathic helix SIN3-like protein; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|A0A0S3T2A7|A0A0S3T2A7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312500
Domains
15
LotjaGi4g1v0176600.1
– Paired amphipathic helix SIN3-like protein; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|K7L9N1|K7L9N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0176600
Domains
16
LotjaGi6g1v0085300_LC.2
– Paired amphipathic helix protein Sin3; TAIR: AT5G15020.1 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|A0A0L9TEZ6|A0A0L9TEZ6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0085300_LC
Domains
5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
PTHR12346:SF24 PANTHER 1 3.57