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PS51477

Source: ProSiteProfiles

Description

PAH domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

Associated Lotus transcripts 19

Transcript Name Description Predicted domains Domain count
Lj0g3v0152569.1
– SIN3 component, histone deacetylase complex [Populus trichocarpa] gi|224100205|ref|XP_002311786.1|
Domains
6
Lj0g3v0239369.1
– PREDICTED: paired amphipathic helix protein Sin3-like 3-like [Glycine max] gi|356526870|ref|XP_003532039.1|
Domains
12
Lj0g3v0300059.1
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1|
Domains
6
Lj2g3v1022350.1
– PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine max] gi|356550937|ref|XP_003543838.1|
Domains
14
Lj2g3v1022350.3
– PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Glycine max] gi|356550937|ref|XP_003543838.1|
Domains
12
Lj2g3v1365810.1
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1|
Domains
13
Lj2g3v1365810.2
– PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine max] gi|356498069|ref|XP_003517876.1|
Domains
13
LotjaGi2g1v0004400_LC.1
– Paired amphipathic helix protein Sin3; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|A0A0B2NVG5|A0A0B2NVG5_GLYSO Paired amphipathic helix protein Sin3-like 4; Found in the gene: LotjaGi2g1v0004400_LC
Domains
10
LotjaGi2g1v0252800.1
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z6|I1N5Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.2
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|V7C1D5|V7C1D5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.5
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z6|I1N5Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.6
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|A0A0B2PVE5|A0A0B2PVE5_GLYSO Paired amphipathic helix protein Sin3-like 2; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.7
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z7|I1N5Z7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.8
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|K7LXD7|K7LXD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0252800.9
– Paired amphipathic helix SIN3-like protein; TAIR: AT5G15020.2 SIN3-like 2; Swiss-Prot: sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2; TrEMBL-Plants: tr|I1N5Z7|I1N5Z7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252800
Domains
16
LotjaGi2g1v0312500.1
– Paired amphipathic helix SIN3-like protein; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|A0A0S3T2A7|A0A0S3T2A7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312500
Domains
15
LotjaGi2g1v0312500.2
– Paired amphipathic helix SIN3-like protein; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|A0A0S3T2A7|A0A0S3T2A7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312500
Domains
15
LotjaGi2g1v0312500.3
– Paired amphipathic helix SIN3-like protein; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|A0A0S3T2A7|A0A0S3T2A7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312500
Domains
15
LotjaGi4g1v0176600.1
– Paired amphipathic helix SIN3-like protein; TAIR: AT1G70060.1 SIN3-like 4; Swiss-Prot: sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4; TrEMBL-Plants: tr|K7L9N1|K7L9N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0176600
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.26