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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0243819 |
| Transcript ID | Lj0g3v0243819.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transport protein 5-like [Glycine max] gi|356551684|ref|XP_003544204.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 9 | 421 | 413 | 1.70E-293 | – | |
| PANTHER | 9 | 421 | 413 | 1.70E-293 | – | |
| TIGRFAM | 19 | 420 | 402 | 4.80E-82 | ||
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 21 | 41 | 21 | – | – | |
| ProSiteProfiles | 28 | 421 | 394 | 38.303 | ||
| Pfam | 29 | 420 | 392 | 4.80E-90 | ||
| SUPERFAMILY | 30 | 236 | 207 | 1.27E-46 | ||
| PRINTS | 36 | 46 | 11 | 6.50E-27 | ||
| Phobius | 42 | 81 | 40 | – | – | |
| Gene3D | 63 | 226 | 164 | 2.80E-22 | – | |
| CDD | 78 | 416 | 339 | 2.38E-15 | ||
| Phobius | 82 | 101 | 20 | – | – | |
| TMHMM | 82 | 104 | 23 | – | – | |
| Phobius | 102 | 112 | 11 | – | – | |
| Phobius | 113 | 131 | 19 | – | – | |
| Phobius | 132 | 136 | 5 | – | – | |
| Phobius | 137 | 159 | 23 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| PRINTS | 138 | 157 | 20 | 6.50E-27 | ||
| ProSitePatterns | 143 | 168 | 26 | – | ||
| Phobius | 160 | 170 | 11 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 171 | 192 | 22 | – | – | |
| Phobius | 193 | 197 | 5 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 198 | 221 | 24 | – | – | |
| Phobius | 222 | 284 | 63 | – | – | |
| SUPERFAMILY | 264 | 419 | 156 | 1.27E-46 | ||
| Phobius | 285 | 308 | 24 | – | – | |
| Gene3D | 286 | 418 | 133 | 1.90E-12 | – | |
| PRINTS | 295 | 305 | 11 | 6.50E-27 | ||
| Phobius | 309 | 319 | 11 | – | – | |
| Phobius | 320 | 343 | 24 | – | – | |
| TMHMM | 321 | 343 | 23 | – | – | |
| ProSitePatterns | 339 | 356 | 18 | – | ||
| Phobius | 344 | 349 | 6 | – | – | |
| TMHMM | 350 | 372 | 23 | – | – | |
| Phobius | 350 | 372 | 23 | – | – | |
| Phobius | 373 | 387 | 15 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 388 | 412 | 25 | – | – | |
| PRINTS | 391 | 412 | 22 | 6.50E-27 | ||
| Phobius | 413 | 421 | 9 | – | – | |
| PRINTS | 414 | 421 | 8 | 6.50E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0243819.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0243819.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.