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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0243839 |
| Transcript ID | Lj0g3v0243839.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis sativus] gi|449447579|ref|XP_004141545.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| MobiDBLite | 1 | 20 | 20 | – | – | |
| SignalP | 1 | 12 | 12 | – | – | |
| Phobius | 3 | 13 | 11 | – | – | |
| PANTHER | 11 | 202 | 192 | 1.60E-59 | ||
| PANTHER | 11 | 202 | 192 | 1.60E-59 | – | |
| Phobius | 14 | 24 | 11 | – | – | |
| Phobius | 25 | 116 | 92 | – | – | |
| Coils | 42 | 62 | 21 | – | – | |
| MobiDBLite | 44 | 110 | 67 | – | – | |
| SUPERFAMILY | 52 | 106 | 55 | 4.89E-07 | ||
| TMHMM | 115 | 137 | 23 | – | – | |
| Phobius | 117 | 137 | 21 | – | – | |
| Phobius | 138 | 157 | 20 | – | – | |
| TMHMM | 150 | 172 | 23 | – | – | |
| Phobius | 158 | 178 | 21 | – | – | |
| TMHMM | 177 | 199 | 23 | – | – | |
| Phobius | 179 | 183 | 5 | – | – | |
| Phobius | 184 | 202 | 19 | – | – | |
| Phobius | 203 | 203 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0243839.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0243839.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.