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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0249549 |
| Transcript ID | Lj0g3v0249549.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Sec14p-like phosphatidylinositol transfer family protein isoform 1 [Theobroma cacao] gi|508719950|gb|EOY11847.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 578 | 578 | – | – | |
| PANTHER | 17 | 329 | 313 | 3.30E-289 | – | |
| PANTHER | 17 | 329 | 313 | 3.30E-289 | – | |
| SUPERFAMILY | 64 | 131 | 68 | 3.92E-18 | ||
| Gene3D | 64 | 116 | 53 | 7.10E-15 | – | |
| Pfam | 88 | 114 | 27 | 4.10E-07 | ||
| SMART | 90 | 115 | 26 | 1.20E-08 | ||
| Gene3D | 117 | 332 | 216 | 8.40E-69 | ||
| SUPERFAMILY | 134 | 331 | 198 | 1.44E-49 | ||
| ProSiteProfiles | 135 | 310 | 176 | 24.556 | ||
| SMART | 135 | 307 | 173 | 8.50E-50 | ||
| Pfam | 138 | 305 | 168 | 5.70E-29 | ||
| CDD | 146 | 304 | 159 | 1.19E-32 | – | |
| MobiDBLite | 358 | 379 | 22 | – | – | |
| PANTHER | 455 | 579 | 125 | 3.30E-289 | – | |
| PANTHER | 455 | 579 | 125 | 3.30E-289 | – | |
| Coils | 527 | 547 | 21 | – | – | |
| Phobius | 579 | 595 | 17 | – | – | |
| Phobius | 596 | 596 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0249549.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0249549.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.