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Lj0g3v0273289.1

Overview

Field Value
Gene ID Lj0g3v0273289
Transcript ID Lj0g3v0273289.1
Lotus japonicus genome version MG20 v3.0
Description KTEL motif-containing protein [Medicago truncatula] gi|357497409|ref|XP_003618993.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 29 29
Phobius 30 52 23
TMHMM 30 52 23
Phobius 53 515 463
PANTHER 75 515 441 3.80E-300
PANTHER 75 515 441 3.80E-300
MobiDBLite 91 110 20
Pfam 113 507 395 5.50E-193
SMART 189 437 249 4.40E-146
Coils 489 509 21

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj0g3v0273289.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0273289.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.