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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0274609 |
| Transcript ID | Lj0g3v0274609.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PQ-loop repeat-containing protein [Medicago truncatula] gi|357497257|ref|XP_003618917.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | – | – | |
| PANTHER | 9 | 162 | 154 | 7.00E-105 | – | |
| PANTHER | 9 | 162 | 154 | 7.00E-105 | – | |
| Phobius | 32 | 52 | 21 | – | – | |
| Pfam | 33 | 87 | 55 | 2.40E-21 | ||
| TMHMM | 34 | 56 | 23 | – | – | |
| SMART | 46 | 77 | 32 | 5.70E-13 | ||
| Phobius | 53 | 63 | 11 | – | – | |
| TMHMM | 63 | 85 | 23 | – | – | |
| Phobius | 64 | 82 | 19 | – | – | |
| Phobius | 83 | 93 | 11 | – | – | |
| Phobius | 94 | 115 | 22 | – | – | |
| TMHMM | 95 | 117 | 23 | – | – | |
| Phobius | 116 | 239 | 124 | – | – | |
| PANTHER | 208 | 392 | 185 | 7.00E-105 | – | |
| PANTHER | 208 | 392 | 185 | 7.00E-105 | – | |
| TMHMM | 240 | 257 | 18 | – | – | |
| Phobius | 240 | 257 | 18 | – | – | |
| Phobius | 258 | 291 | 34 | – | – | |
| TMHMM | 291 | 313 | 23 | – | – | |
| Phobius | 292 | 312 | 21 | – | – | |
| Pfam | 298 | 357 | 60 | 1.60E-13 | ||
| SMART | 312 | 343 | 32 | 3.50E-05 | ||
| Phobius | 313 | 332 | 20 | – | – | |
| TMHMM | 332 | 354 | 23 | – | – | |
| Phobius | 333 | 351 | 19 | – | – | |
| Phobius | 352 | 362 | 11 | – | – | |
| Phobius | 363 | 386 | 24 | – | – | |
| TMHMM | 364 | 386 | 23 | – | – | |
| Phobius | 387 | 404 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0274609.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0274609.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.