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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0274969 |
| Transcript ID | Lj0g3v0274969.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transport protein 5-like [Glycine max] gi|356552878|ref|XP_003544789.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 205 | 205 | 20.608 | ||
| PANTHER | 1 | 226 | 226 | 2.20E-159 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 1 | 226 | 226 | 2.20E-159 | – | |
| Pfam | 6 | 216 | 211 | 1.30E-52 | ||
| Gene3D | 11 | 205 | 195 | 1.20E-16 | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 12 | 35 | 24 | – | – | |
| SUPERFAMILY | 13 | 210 | 198 | 4.19E-23 | ||
| PRINTS | 22 | 32 | 11 | 2.20E-13 | ||
| Phobius | 36 | 46 | 11 | – | – | |
| Phobius | 47 | 70 | 24 | – | – | |
| TMHMM | 49 | 70 | 22 | – | – | |
| Phobius | 71 | 76 | 6 | – | – | |
| Phobius | 77 | 99 | 23 | – | – | |
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 100 | 114 | 15 | – | – | |
| TMHMM | 114 | 136 | 23 | – | – | |
| Phobius | 115 | 139 | 25 | – | – | |
| PRINTS | 118 | 139 | 22 | 2.20E-13 | ||
| Phobius | 140 | 150 | 11 | – | – | |
| PRINTS | 141 | 153 | 13 | 2.20E-13 | ||
| Phobius | 151 | 171 | 21 | – | – | |
| TMHMM | 156 | 175 | 20 | – | – | |
| Phobius | 172 | 182 | 11 | – | – | |
| TMHMM | 180 | 202 | 23 | – | – | |
| Phobius | 183 | 202 | 20 | – | – | |
| Phobius | 203 | 227 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0274969.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0274969.1, powered by CORGI.
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