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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0276659 |
| Transcript ID | Lj0g3v0276659.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protoporphyrinogen oxidase, chloroplastic-like [Cicer arietinum] gi|502117534|ref|XP_004495854.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 162 | 162 | 9.00E-69 | – | |
| PANTHER | 1 | 162 | 162 | 9.00E-69 | – | |
| Gene3D | 1 | 27 | 27 | 9.90E-05 | – | |
| Pfam | 1 | 148 | 148 | 1.30E-17 | ||
| TIGRFAM | 1 | 162 | 162 | 5.40E-46 | ||
| SUPERFAMILY | 4 | 147 | 144 | 5.96E-11 | ||
| MobiDBLite | 27 | 50 | 24 | – | – | |
| Gene3D | 63 | 152 | 90 | 6.80E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxygen-dependent protoporphyrinogen oxidase activity | Catalysis of the reaction: 3 O(2) + protoporphyrinogen IX = 3 H(2)O(2) + protoporphyrin IX. | ||
| Biological process | Porphyrin-containing compound biosynthetic process | The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0276659.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0276659.2, powered by CORGI.
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