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Lj0g3v0281149.1

Overview

Field Value
Gene ID Lj0g3v0281149
Transcript ID Lj0g3v0281149.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable amino acid permease 7-like [Glycine max] gi|356566280|ref|XP_003551361.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 460 460 3.50E-303
PANTHER 1 460 460 3.50E-303
Phobius 1 31 31
Pfam 25 456 432 7.40E-101
TMHMM 26 48 23
Phobius 32 50 19
Phobius 51 55 5
TMHMM 55 77 23
Phobius 56 77 22
Phobius 78 109 32
TMHMM 110 132 23
Phobius 110 129 20
Phobius 130 154 25
TMHMM 153 175 23
Phobius 155 174 20
Phobius 175 180 6
Phobius 181 207 27
TMHMM 185 207 23
Phobius 208 226 19
Phobius 227 249 23
Phobius 250 269 20
Phobius 270 289 20
TMHMM 272 294 23
Phobius 290 308 19
TMHMM 309 331 23
Phobius 309 330 22
Phobius 331 372 42
Phobius 373 393 21
TMHMM 388 410 23
Phobius 394 398 5
Phobius 399 419 21
Phobius 420 430 11
TMHMM 430 452 23
Phobius 431 452 22
Phobius 453 461 9

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj0g3v0281149.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0281149.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.