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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0289499 |
| Transcript ID | Lj0g3v0289499.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein isoform 3 [Theobroma cacao] gi|508774997|gb|EOY22253.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 83 | 83 | – | – | |
| PANTHER | 6 | 847 | 842 | 0 | ||
| PANTHER | 6 | 847 | 842 | 0 | – | |
| Pfam | 41 | 106 | 66 | 1.40E-23 | ||
| SUPERFAMILY | 55 | 142 | 88 | 1.06E-28 | – | |
| TIGRFAM | 56 | 846 | 791 | 0 | ||
| TMHMM | 83 | 105 | 23 | – | – | |
| Gene3D | 83 | 212 | 130 | 3.80E-36 | ||
| Phobius | 84 | 102 | 19 | – | – | |
| Phobius | 103 | 107 | 5 | – | – | |
| Phobius | 108 | 124 | 17 | – | – | |
| Phobius | 125 | 302 | 178 | – | – | |
| SUPERFAMILY | 147 | 210 | 64 | 1.44E-15 | – | |
| SUPERFAMILY | 245 | 285 | 41 | 1.44E-15 | – | |
| Gene3D | 250 | 286 | 37 | 3.80E-36 | ||
| SUPERFAMILY | 287 | 330 | 44 | 1.06E-28 | – | |
| TMHMM | 303 | 325 | 23 | – | – | |
| Phobius | 303 | 325 | 23 | – | – | |
| Phobius | 326 | 357 | 32 | – | – | |
| Phobius | 358 | 379 | 22 | – | – | |
| SUPERFAMILY | 359 | 419 | 61 | 1.06E-28 | – | |
| TMHMM | 362 | 384 | 23 | – | – | |
| Phobius | 380 | 852 | 473 | – | – | |
| SUPERFAMILY | 413 | 437 | 25 | 8.98E-19 | ||
| Gene3D | 415 | 461 | 47 | 4.40E-46 | ||
| ProSitePatterns | 427 | 433 | 7 | – | ||
| SUPERFAMILY | 484 | 701 | 218 | 2.18E-25 | ||
| Gene3D | 509 | 706 | 198 | 4.40E-46 | ||
| Pfam | 521 | 625 | 105 | 1.30E-09 | – | |
| SUPERFAMILY | 626 | 661 | 36 | 8.98E-19 | ||
| SUPERFAMILY | 694 | 756 | 63 | 8.98E-19 | ||
| Gene3D | 707 | 762 | 56 | 8.70E-26 | ||
| SUPERFAMILY | 792 | 836 | 45 | 8.98E-19 | ||
| Gene3D | 833 | 847 | 15 | 8.70E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj0g3v0289499.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0289499.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.