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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0293709 |
| Transcript ID | Lj0g3v0293709.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chloride channel protein CLC-f-like isoform X1 [Cicer arietinum] gi|502127375|ref|XP_004499681.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 108 | 108 | – | – | |
| PANTHER | 11 | 332 | 322 | 9.60E-178 | – | |
| PANTHER | 11 | 332 | 322 | 9.60E-178 | – | |
| MobiDBLite | 59 | 91 | 33 | – | – | |
| Gene3D | 106 | 328 | 223 | 9.50E-37 | ||
| SUPERFAMILY | 106 | 353 | 248 | 4.97E-35 | ||
| Phobius | 109 | 129 | 21 | – | – | |
| TMHMM | 110 | 129 | 20 | – | – | |
| CDD | 125 | 332 | 208 | 1.01E-30 | – | |
| Phobius | 130 | 163 | 34 | – | – | |
| TMHMM | 160 | 182 | 23 | – | – | |
| Phobius | 164 | 185 | 22 | – | – | |
| Pfam | 186 | 335 | 150 | 2.20E-25 | ||
| Phobius | 186 | 253 | 68 | – | – | |
| PRINTS | 211 | 230 | 20 | 3.80E-09 | ||
| Phobius | 254 | 280 | 27 | – | – | |
| TMHMM | 255 | 277 | 23 | – | – | |
| PRINTS | 262 | 281 | 20 | 3.80E-09 | ||
| Phobius | 281 | 294 | 14 | – | – | |
| TMHMM | 292 | 314 | 23 | – | – | |
| Phobius | 295 | 314 | 20 | – | – | |
| Phobius | 315 | 334 | 20 | – | – | |
| Phobius | 335 | 355 | 21 | – | – | |
| TMHMM | 335 | 357 | 23 | – | – | |
| Phobius | 356 | 358 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated chloride channel activity | Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Chloride transport | The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0293709.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0293709.1, powered by CORGI.
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