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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0295969 |
| Transcript ID | Lj0g3v0295969.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Solute carrier family 22 member [Medicago truncatula] gi|357515127|ref|XP_003627852.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 131 | 131 | – | – | |
| MobiDBLite | 1 | 24 | 24 | – | – | |
| PANTHER | 32 | 511 | 480 | 5.90E-269 | – | |
| PANTHER | 32 | 511 | 480 | 5.90E-269 | – | |
| TMHMM | 38 | 60 | 23 | – | – | |
| ProSiteProfiles | 48 | 497 | 450 | 15.036 | ||
| Pfam | 89 | 500 | 412 | 2.90E-27 | ||
| SUPERFAMILY | 114 | 496 | 383 | 9.02E-42 | ||
| CDD | 121 | 485 | 365 | 1.71E-13 | ||
| Gene3D | 122 | 269 | 148 | 2.20E-16 | – | |
| TMHMM | 125 | 147 | 23 | – | – | |
| Phobius | 132 | 151 | 20 | – | – | |
| Phobius | 152 | 157 | 6 | – | – | |
| Phobius | 158 | 180 | 23 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 181 | 185 | 5 | – | – | |
| TMHMM | 186 | 203 | 18 | – | – | |
| Phobius | 186 | 203 | 18 | – | – | |
| Phobius | 204 | 214 | 11 | – | – | |
| Phobius | 215 | 236 | 22 | – | – | |
| TMHMM | 215 | 237 | 23 | – | – | |
| Phobius | 237 | 241 | 5 | – | – | |
| TMHMM | 242 | 264 | 23 | – | – | |
| Phobius | 242 | 264 | 23 | – | – | |
| Phobius | 265 | 327 | 63 | – | – | |
| Gene3D | 320 | 506 | 187 | 1.50E-08 | – | |
| Phobius | 328 | 348 | 21 | – | – | |
| TMHMM | 328 | 350 | 23 | – | – | |
| Phobius | 349 | 353 | 5 | – | – | |
| Phobius | 354 | 377 | 24 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 378 | 385 | 8 | – | – | |
| TMHMM | 384 | 402 | 19 | – | – | |
| Phobius | 386 | 404 | 19 | – | – | |
| Phobius | 405 | 415 | 11 | – | – | |
| TMHMM | 412 | 434 | 23 | – | – | |
| Phobius | 416 | 436 | 21 | – | – | |
| Phobius | 437 | 447 | 11 | – | – | |
| TMHMM | 447 | 464 | 18 | – | – | |
| Phobius | 448 | 466 | 19 | – | – | |
| Phobius | 467 | 471 | 5 | – | – | |
| Phobius | 472 | 492 | 21 | – | – | |
| TMHMM | 479 | 501 | 23 | – | – | |
| Phobius | 493 | 541 | 49 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0295969.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0295969.1, powered by CORGI.
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