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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0297259 |
| Transcript ID | Lj0g3v0297259.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Fragaria vesca subsp]. vesca] gi|470137256|ref|XP_004304385.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | – | – | |
| PANTHER | 1 | 579 | 579 | 0 | – | |
| PANTHER | 1 | 579 | 579 | 0 | – | |
| Phobius | 1 | 572 | 572 | – | – | |
| Gene3D | 35 | 163 | 129 | 1.20E-34 | ||
| Pfam | 41 | 133 | 93 | 3.20E-22 | ||
| SUPERFAMILY | 41 | 178 | 138 | 6.55E-36 | ||
| SMART | 41 | 137 | 97 | 3.60E-19 | ||
| CDD | 41 | 165 | 125 | 1.27E-63 | – | |
| ProSiteProfiles | 42 | 122 | 81 | 14.97 | ||
| Gene3D | 183 | 310 | 128 | 1.50E-24 | ||
| Pfam | 202 | 308 | 107 | 1.60E-19 | ||
| SUPERFAMILY | 202 | 355 | 154 | 1.42E-30 | ||
| SMART | 203 | 301 | 99 | 2.70E-10 | ||
| CDD | 203 | 353 | 151 | 9.29E-87 | – | |
| ProSiteProfiles | 204 | 286 | 83 | 12.824 | ||
| Gene3D | 362 | 496 | 135 | 2.40E-29 | ||
| Pfam | 364 | 475 | 112 | 2.10E-23 | ||
| SUPERFAMILY | 364 | 504 | 141 | 1.71E-28 | ||
| SMART | 365 | 472 | 108 | 5.70E-14 | ||
| CDD | 365 | 492 | 128 | 1.43E-68 | – | |
| ProSiteProfiles | 366 | 457 | 92 | 9.539 | ||
| Phobius | 573 | 590 | 18 | – | – | |
| TMHMM | 573 | 590 | 18 | – | – | |
| Phobius | 591 | 595 | 5 | – | – | |
| Phobius | 596 | 613 | 18 | – | – | |
| TMHMM | 603 | 625 | 23 | – | – | |
| Phobius | 614 | 617 | 4 | – | – | |
| Phobius | 618 | 635 | 18 | – | – | |
| Pfam | 620 | 775 | 156 | 2.40E-81 | ||
| Phobius | 636 | 716 | 81 | – | – | |
| PANTHER | 651 | 771 | 121 | 0 | – | |
| PANTHER | 651 | 771 | 121 | 0 | – | |
| TMHMM | 716 | 747 | 32 | – | – | |
| Phobius | 717 | 747 | 31 | – | – | |
| Phobius | 748 | 775 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0297259.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0297259.1, powered by CORGI.
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