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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0299079 |
| Transcript ID | Lj0g3v0299079.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable inositol transporter 1-like [Glycine max] gi|356576905|ref|XP_003556570.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 407 | 407 | 48.278 | ||
| Phobius | 1 | 16 | 16 | – | – | |
| Pfam | 15 | 418 | 404 | 2.30E-111 | ||
| TIGRFAM | 15 | 414 | 400 | 2.00E-108 | ||
| PANTHER | 15 | 435 | 421 | 2.10E-288 | – | |
| PANTHER | 15 | 435 | 421 | 2.10E-288 | – | |
| Phobius | 17 | 35 | 19 | – | – | |
| SUPERFAMILY | 17 | 415 | 399 | 6.28E-66 | ||
| TMHMM | 17 | 36 | 20 | – | – | |
| Gene3D | 18 | 166 | 149 | 3.90E-25 | – | |
| CDD | 35 | 403 | 369 | 1.80E-26 | ||
| Phobius | 36 | 46 | 11 | – | – | |
| TMHMM | 46 | 63 | 18 | – | – | |
| Phobius | 47 | 64 | 18 | – | – | |
| Phobius | 65 | 69 | 5 | – | – | |
| PRINTS | 70 | 89 | 20 | 2.80E-20 | ||
| Phobius | 70 | 91 | 22 | – | – | |
| TMHMM | 70 | 92 | 23 | – | – | |
| ProSitePatterns | 75 | 100 | 26 | – | ||
| Phobius | 92 | 102 | 11 | – | – | |
| TMHMM | 102 | 124 | 23 | – | – | |
| Phobius | 103 | 125 | 23 | – | – | |
| Phobius | 126 | 130 | 5 | – | – | |
| Phobius | 131 | 153 | 23 | – | – | |
| TMHMM | 131 | 153 | 23 | – | – | |
| Phobius | 154 | 215 | 62 | – | – | |
| Phobius | 216 | 239 | 24 | – | – | |
| Gene3D | 223 | 410 | 188 | 3.30E-18 | – | |
| PRINTS | 228 | 238 | 11 | 2.80E-20 | ||
| Phobius | 240 | 253 | 14 | – | – | |
| Phobius | 254 | 278 | 25 | – | – | |
| TMHMM | 255 | 277 | 23 | – | – | |
| ProSitePatterns | 273 | 289 | 17 | – | ||
| Phobius | 279 | 284 | 6 | – | – | |
| TMHMM | 284 | 306 | 23 | – | – | |
| Phobius | 285 | 305 | 21 | – | – | |
| Phobius | 306 | 316 | 11 | – | – | |
| TMHMM | 316 | 338 | 23 | – | – | |
| Phobius | 317 | 340 | 24 | – | – | |
| PRINTS | 319 | 340 | 22 | 2.80E-20 | ||
| Phobius | 341 | 351 | 11 | – | – | |
| PRINTS | 342 | 354 | 13 | 2.80E-20 | ||
| TMHMM | 351 | 373 | 23 | – | – | |
| Phobius | 352 | 373 | 22 | – | – | |
| Phobius | 374 | 378 | 5 | – | – | |
| TMHMM | 378 | 400 | 23 | – | – | |
| Phobius | 379 | 403 | 25 | – | – | |
| Phobius | 404 | 435 | 32 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0299079.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0299079.2, powered by CORGI.
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