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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0300499 |
| Transcript ID | Lj0g3v0300499.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mitochondrial metalloendopeptidase OMA1 [Vitis vinifera] gi|225455604|ref|XP_002269952.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 98 | 98 | – | – | |
| PANTHER | 1 | 175 | 175 | 4.10E-131 | – | |
| PANTHER | 1 | 175 | 175 | 4.10E-131 | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 99 | 117 | 19 | – | – | |
| Phobius | 118 | 307 | 190 | – | – | |
| PANTHER | 221 | 417 | 197 | 4.10E-131 | – | |
| PANTHER | 221 | 417 | 197 | 4.10E-131 | – | |
| Pfam | 244 | 398 | 155 | 6.80E-30 | ||
| Gene3D | 247 | 303 | 57 | 6.60E-15 | – | |
| Phobius | 308 | 334 | 27 | – | – | |
| Phobius | 335 | 423 | 89 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj0g3v0300499.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0300499.1, powered by CORGI.
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