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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0300849 |
| Transcript ID | Lj0g3v0300849.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Mannitol transporter [Medicago truncatula] gi|357496021|ref|XP_003618299.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 54 | 54 | – | – | |
| PANTHER | 21 | 526 | 506 | 0 | – | |
| PANTHER | 21 | 526 | 506 | 0 | – | |
| SUPERFAMILY | 27 | 500 | 474 | 6.02E-75 | ||
| TIGRFAM | 47 | 499 | 453 | 2.90E-106 | ||
| Gene3D | 53 | 246 | 194 | 1.30E-27 | – | |
| TMHMM | 55 | 77 | 23 | – | – | |
| Phobius | 55 | 83 | 29 | – | – | |
| Pfam | 59 | 503 | 445 | 3.40E-109 | ||
| ProSiteProfiles | 59 | 492 | 434 | 51.191 | ||
| CDD | 61 | 488 | 428 | 6.41E-39 | ||
| PRINTS | 67 | 77 | 11 | 4.10E-24 | ||
| Phobius | 84 | 94 | 11 | – | – | |
| TMHMM | 92 | 114 | 23 | – | – | |
| Phobius | 95 | 114 | 20 | – | – | |
| ProSitePatterns | 113 | 130 | 18 | – | ||
| Phobius | 115 | 125 | 11 | – | – | |
| Phobius | 126 | 148 | 23 | – | – | |
| TMHMM | 127 | 149 | 23 | – | – | |
| Phobius | 149 | 153 | 5 | – | – | |
| PRINTS | 150 | 169 | 20 | 4.10E-24 | ||
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 154 | 171 | 18 | – | – | |
| ProSitePatterns | 155 | 180 | 26 | – | ||
| Phobius | 172 | 182 | 11 | – | – | |
| Phobius | 183 | 200 | 18 | – | – | |
| TMHMM | 189 | 208 | 20 | – | – | |
| Phobius | 201 | 211 | 11 | – | – | |
| Phobius | 212 | 235 | 24 | – | – | |
| TMHMM | 213 | 235 | 23 | – | – | |
| Phobius | 236 | 302 | 67 | – | – | |
| Coils | 248 | 282 | 35 | – | – | |
| Phobius | 303 | 326 | 24 | – | – | |
| Gene3D | 304 | 500 | 197 | 2.10E-18 | – | |
| PRINTS | 314 | 324 | 11 | 4.10E-24 | ||
| Phobius | 327 | 340 | 14 | – | – | |
| TMHMM | 341 | 363 | 23 | – | – | |
| Phobius | 341 | 363 | 23 | – | – | |
| ProSitePatterns | 359 | 376 | 18 | – | ||
| Phobius | 364 | 369 | 6 | – | – | |
| Phobius | 370 | 394 | 25 | – | – | |
| TMHMM | 373 | 395 | 23 | – | – | |
| Phobius | 395 | 399 | 5 | – | – | |
| Phobius | 400 | 426 | 27 | – | – | |
| TMHMM | 402 | 424 | 23 | – | – | |
| PRINTS | 404 | 425 | 22 | 4.10E-24 | ||
| PRINTS | 427 | 439 | 13 | 4.10E-24 | ||
| Phobius | 427 | 437 | 11 | – | – | |
| Phobius | 438 | 460 | 23 | – | – | |
| Phobius | 461 | 465 | 5 | – | – | |
| TMHMM | 463 | 485 | 23 | – | – | |
| Phobius | 466 | 488 | 23 | – | – | |
| Phobius | 489 | 534 | 46 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0300849.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0300849.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.