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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0300919 |
| Transcript ID | Lj0g3v0300919.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable plastidic glucose transporter 3-like [Glycine max] gi|356526129|ref|XP_003531672.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 59 | 59 | – | – | |
| PANTHER | 36 | 449 | 414 | 1.70E-298 | – | |
| PANTHER | 36 | 449 | 414 | 1.70E-298 | – | |
| TIGRFAM | 38 | 448 | 411 | 1.60E-77 | ||
| SUPERFAMILY | 45 | 445 | 401 | 1.44E-54 | ||
| Gene3D | 55 | 239 | 185 | 4.70E-26 | – | |
| TMHMM | 57 | 76 | 20 | – | – | |
| ProSiteProfiles | 59 | 449 | 391 | 39.515 | ||
| Phobius | 60 | 78 | 19 | – | – | |
| Pfam | 60 | 446 | 387 | 3.10E-82 | ||
| CDD | 60 | 445 | 386 | 5.86E-20 | ||
| PRINTS | 67 | 77 | 11 | 1.30E-18 | ||
| Phobius | 79 | 97 | 19 | – | – | |
| TMHMM | 96 | 118 | 23 | – | – | |
| Phobius | 98 | 118 | 21 | – | – | |
| Phobius | 119 | 129 | 11 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| Phobius | 130 | 149 | 20 | – | – | |
| Phobius | 150 | 154 | 5 | – | – | |
| PRINTS | 152 | 171 | 20 | 1.30E-18 | ||
| Phobius | 155 | 173 | 19 | – | – | |
| TMHMM | 157 | 176 | 20 | – | – | |
| Phobius | 174 | 184 | 11 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 185 | 206 | 22 | – | – | |
| Phobius | 207 | 211 | 5 | – | – | |
| TMHMM | 210 | 232 | 23 | – | – | |
| Phobius | 212 | 235 | 24 | – | – | |
| Phobius | 236 | 294 | 59 | – | – | |
| Phobius | 295 | 319 | 25 | – | – | |
| TMHMM | 295 | 317 | 23 | – | – | |
| Gene3D | 298 | 445 | 148 | 1.20E-10 | – | |
| PRINTS | 306 | 316 | 11 | 1.30E-18 | ||
| Phobius | 320 | 330 | 11 | – | – | |
| Phobius | 331 | 351 | 21 | – | – | |
| TMHMM | 332 | 351 | 20 | – | – | |
| ProSitePatterns | 347 | 363 | 17 | – | ||
| Phobius | 352 | 357 | 6 | – | – | |
| TMHMM | 358 | 377 | 20 | – | – | |
| Phobius | 358 | 382 | 25 | – | – | |
| Phobius | 383 | 393 | 11 | – | – | |
| PRINTS | 392 | 413 | 22 | 1.30E-18 | ||
| TMHMM | 392 | 414 | 23 | – | – | |
| Phobius | 394 | 414 | 21 | – | – | |
| Phobius | 415 | 425 | 11 | – | – | |
| PRINTS | 415 | 427 | 13 | 1.30E-18 | ||
| Phobius | 426 | 446 | 21 | – | – | |
| TMHMM | 426 | 448 | 23 | – | – | |
| Phobius | 447 | 449 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0300919.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0300919.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.