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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0301119 |
| Transcript ID | Lj0g3v0301119.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: inositol transporter 4-like [Glycine max] gi|356532347|ref|XP_003534735.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| PANTHER | 7 | 373 | 367 | 2.90E-301 | – | |
| PANTHER | 7 | 373 | 367 | 2.90E-301 | – | |
| SUPERFAMILY | 17 | 374 | 358 | 2.62E-57 | ||
| TIGRFAM | 21 | 373 | 353 | 1.40E-97 | ||
| TMHMM | 28 | 50 | 23 | – | – | |
| Phobius | 28 | 53 | 26 | – | – | |
| ProSiteProfiles | 28 | 490 | 463 | 49.15 | ||
| Pfam | 29 | 367 | 339 | 6.30E-95 | ||
| CDD | 30 | 366 | 337 | 2.76E-28 | ||
| Gene3D | 33 | 216 | 184 | 9.70E-28 | – | |
| PRINTS | 36 | 46 | 11 | 7.10E-28 | ||
| Phobius | 54 | 64 | 11 | – | – | |
| Phobius | 65 | 85 | 21 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 86 | 96 | 11 | – | – | |
| Phobius | 97 | 115 | 19 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| Phobius | 116 | 120 | 5 | – | – | |
| Phobius | 121 | 143 | 23 | – | – | |
| PRINTS | 122 | 141 | 20 | 7.10E-28 | ||
| TMHMM | 126 | 144 | 19 | – | – | |
| ProSitePatterns | 127 | 152 | 26 | – | ||
| Phobius | 144 | 154 | 11 | – | – | |
| TMHMM | 151 | 173 | 23 | – | – | |
| Phobius | 155 | 177 | 23 | – | – | |
| Phobius | 178 | 182 | 5 | – | – | |
| Phobius | 183 | 205 | 23 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 206 | 274 | 69 | – | – | |
| Phobius | 275 | 298 | 24 | – | – | |
| TMHMM | 275 | 297 | 23 | – | – | |
| Gene3D | 280 | 365 | 86 | 2.60E-12 | – | |
| PRINTS | 286 | 296 | 11 | 7.10E-28 | ||
| Phobius | 299 | 312 | 14 | – | – | |
| TMHMM | 312 | 334 | 23 | – | – | |
| Phobius | 313 | 333 | 21 | – | – | |
| ProSitePatterns | 331 | 347 | 17 | – | ||
| Phobius | 334 | 344 | 11 | – | – | |
| TMHMM | 343 | 365 | 23 | – | – | |
| Phobius | 345 | 366 | 22 | – | – | |
| Phobius | 367 | 449 | 83 | – | – | |
| PANTHER | 442 | 490 | 49 | 2.90E-301 | – | |
| PANTHER | 442 | 490 | 49 | 2.90E-301 | – | |
| Pfam | 448 | 489 | 42 | 7.10E-07 | ||
| Phobius | 450 | 476 | 27 | – | – | |
| Gene3D | 451 | 486 | 36 | 2.60E-12 | – | |
| TMHMM | 454 | 476 | 23 | – | – | |
| PRINTS | 455 | 476 | 22 | 7.10E-28 | ||
| SUPERFAMILY | 456 | 488 | 33 | 2.62E-57 | ||
| Phobius | 477 | 490 | 14 | – | – | |
| PRINTS | 478 | 490 | 13 | 7.10E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0301119.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0301119.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.