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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0304169 |
| Transcript ID | Lj0g3v0304169.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | CAAX amino terminal protease family protein isoform 1 [Theobroma cacao] gi|508710044|gb|EOY01941.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 127 | 127 | 1.20E-58 | – | |
| PANTHER | 1 | 127 | 127 | 1.20E-58 | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 28 | 46 | 19 | – | – | |
| Pfam | 35 | 118 | 84 | 3.40E-18 | ||
| Phobius | 47 | 66 | 20 | – | – | |
| Phobius | 67 | 100 | 34 | – | – | |
| TMHMM | 70 | 92 | 23 | – | – | |
| Phobius | 101 | 105 | 5 | – | – | |
| TMHMM | 105 | 127 | 23 | – | – | |
| Phobius | 106 | 126 | 21 | – | – | |
| Phobius | 127 | 128 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cysteine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | CAAX-box protein processing | The second process in a series of specific posttranslational modifications to the CAAX box region of CAAX box proteins, in which the last three amino acids of the protein (AAX) are removed by proteolysis. |
Expression pattern of Lj0g3v0304169.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0304169.1, powered by CORGI.
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