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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0308889 |
| Transcript ID | Lj0g3v0308889.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cation/H(+) antiporter 24-like [Cicer arietinum] gi|502129485|ref|XP_004500320.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 66 | 66 | – | – | |
| PANTHER | 40 | 437 | 398 | 6.80E-209 | – | |
| PANTHER | 40 | 437 | 398 | 6.80E-209 | – | |
| Phobius | 67 | 85 | 19 | – | – | |
| TMHMM | 68 | 87 | 20 | – | – | |
| Pfam | 77 | 432 | 356 | 1.90E-36 | ||
| Phobius | 86 | 96 | 11 | – | – | |
| TMHMM | 97 | 116 | 20 | – | – | |
| Phobius | 97 | 117 | 21 | – | – | |
| Phobius | 118 | 128 | 11 | – | – | |
| TMHMM | 129 | 148 | 20 | – | – | |
| Phobius | 129 | 149 | 21 | – | – | |
| Phobius | 150 | 160 | 11 | – | – | |
| Phobius | 161 | 183 | 23 | – | – | |
| TMHMM | 163 | 185 | 23 | – | – | |
| Phobius | 184 | 194 | 11 | – | – | |
| TMHMM | 192 | 214 | 23 | – | – | |
| Phobius | 195 | 217 | 23 | – | – | |
| Phobius | 218 | 228 | 11 | – | – | |
| TMHMM | 229 | 251 | 23 | – | – | |
| Phobius | 229 | 250 | 22 | – | – | |
| Phobius | 251 | 261 | 11 | – | – | |
| Phobius | 262 | 280 | 19 | – | – | |
| TMHMM | 264 | 286 | 23 | – | – | |
| Phobius | 281 | 300 | 20 | – | – | |
| TMHMM | 301 | 323 | 23 | – | – | |
| Phobius | 301 | 330 | 30 | – | – | |
| Phobius | 331 | 349 | 19 | – | – | |
| Phobius | 350 | 371 | 22 | – | – | |
| Phobius | 372 | 382 | 11 | – | – | |
| Phobius | 383 | 408 | 26 | – | – | |
| TMHMM | 384 | 406 | 23 | – | – | |
| Phobius | 409 | 413 | 5 | – | – | |
| Phobius | 414 | 434 | 21 | – | – | |
| Phobius | 435 | 437 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0308889.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0308889.1, powered by CORGI.
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