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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0315789 |
| Transcript ID | Lj0g3v0315789.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max] gi|356574629|ref|XP_003555448.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 53 | 53 | – | – | |
| PANTHER | 13 | 319 | 307 | 6.90E-232 | – | |
| PANTHER | 13 | 319 | 307 | 6.90E-232 | – | |
| SUPERFAMILY | 67 | 90 | 24 | 2.35E-07 | – | |
| Gene3D | 67 | 90 | 24 | 6.40E-06 | ||
| SMART | 68 | 90 | 23 | 0.0052 | ||
| ProSiteProfiles | 68 | 90 | 23 | 10.99 | ||
| Pfam | 68 | 90 | 23 | 2.70E-05 | ||
| ProSitePatterns | 70 | 90 | 21 | – | ||
| SMART | 110 | 140 | 31 | 160 | ||
| Gene3D | 133 | 166 | 34 | 1.50E-04 | ||
| SUPERFAMILY | 140 | 165 | 26 | 2.35E-07 | – | |
| SMART | 145 | 165 | 21 | 140 | ||
| MobiDBLite | 264 | 298 | 35 | – | – | |
| MobiDBLite | 308 | 327 | 20 | – | – | |
| PANTHER | 351 | 554 | 204 | 6.90E-232 | – | |
| PANTHER | 351 | 554 | 204 | 6.90E-232 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj0g3v0315789.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0315789.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.