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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0316669 |
| Transcript ID | Lj0g3v0316669.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max] gi|356554054|ref|XP_003545364.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 11 | 172 | 162 | 5.70E-26 | ||
| SUPERFAMILY | 13 | 169 | 157 | 4.08E-34 | ||
| Pfam | 15 | 155 | 141 | 3.70E-21 | ||
| PANTHER | 114 | 243 | 130 | 0 | – | |
| PANTHER | 114 | 243 | 130 | 0 | – | |
| Gene3D | 185 | 243 | 59 | 7.50E-08 | ||
| SUPERFAMILY | 185 | 244 | 60 | 7.65E-10 | ||
| Pfam | 187 | 243 | 57 | 9.10E-06 | ||
| Coils | 240 | 242 | 3 | – | – | |
| Gene3D | 259 | 371 | 113 | 2.10E-17 | ||
| SUPERFAMILY | 259 | 366 | 108 | 2.04E-21 | ||
| Pfam | 259 | 351 | 93 | 8.50E-08 | ||
| Coils | 260 | 260 | 1 | – | – | |
| PANTHER | 271 | 359 | 89 | 0 | – | |
| PANTHER | 271 | 359 | 89 | 0 | – | |
| PANTHER | 377 | 928 | 552 | 0 | – | |
| PANTHER | 377 | 928 | 552 | 0 | – | |
| SUPERFAMILY | 383 | 543 | 161 | 1.28E-37 | ||
| Pfam | 385 | 528 | 144 | 3.90E-20 | ||
| Gene3D | 385 | 542 | 158 | 6.20E-29 | ||
| Gene3D | 569 | 902 | 334 | 8.00E-90 | ||
| ProSiteProfiles | 576 | 871 | 296 | 36.483 | ||
| SUPERFAMILY | 577 | 879 | 303 | 2.11E-93 | ||
| Pfam | 585 | 842 | 258 | 1.60E-46 | ||
| SMART | 622 | 872 | 251 | 1.50E-10 | ||
| Coils | 854 | 874 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Hydrolase activity, acting on glycosyl bonds | Catalysis of the hydrolysis of any glycosyl bond. |
Expression pattern of Lj0g3v0316669.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0316669.2, powered by CORGI.
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