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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0317229 |
| Transcript ID | Lj0g3v0317229.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|357453859|ref|XP_003597210.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 7 | 7 | – | – | |
| Phobius | 1 | 33 | 33 | – | – | |
| SignalP | 1 | 42 | 42 | – | – | |
| PANTHER | 1 | 295 | 295 | 1.20E-105 | – | |
| SignalP | 1 | 33 | 33 | – | – | |
| PANTHER | 1 | 295 | 295 | 1.20E-105 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 8 | 27 | 20 | – | – | |
| Phobius | 28 | 33 | 6 | – | – | |
| Phobius | 34 | 274 | 241 | – | – | |
| MobiDBLite | 38 | 72 | 35 | – | – | |
| SUPERFAMILY | 72 | 222 | 151 | 4.45E-26 | ||
| ProSiteProfiles | 75 | 204 | 130 | 16.878 | ||
| Gene3D | 77 | 221 | 145 | 1.30E-16 | ||
| Pfam | 87 | 221 | 135 | 9.20E-18 | ||
| SMART | 117 | 222 | 106 | 1.10E-14 | ||
| MobiDBLite | 241 | 269 | 29 | – | – | |
| TMHMM | 273 | 295 | 23 | – | – | |
| Phobius | 275 | 295 | 21 | – | – | |
| Phobius | 296 | 300 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0317229.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0317229.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.