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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0317779 |
| Transcript ID | Lj0g3v0317779.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Monosaccharide-sensing protein [Medicago truncatula] gi|357484249|ref|XP_003612412.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| ProSiteProfiles | 1 | 576 | 576 | 21.012 | ||
| CDD | 1 | 158 | 158 | 2.80E-19 | ||
| PANTHER | 3 | 204 | 202 | 7.10E-202 | – | |
| PANTHER | 3 | 204 | 202 | 7.10E-202 | – | |
| Gene3D | 5 | 162 | 158 | 3.50E-24 | – | |
| SUPERFAMILY | 5 | 172 | 168 | 9.81E-43 | ||
| TMHMM | 13 | 35 | 23 | – | – | |
| Pfam | 15 | 192 | 178 | 2.30E-44 | ||
| Phobius | 20 | 41 | 22 | – | – | |
| ProSitePatterns | 35 | 52 | 18 | – | ||
| Phobius | 42 | 47 | 6 | – | – | |
| TMHMM | 45 | 64 | 20 | – | – | |
| Phobius | 48 | 66 | 19 | – | – | |
| Phobius | 67 | 71 | 5 | – | – | |
| TMHMM | 71 | 93 | 23 | – | – | |
| Phobius | 72 | 93 | 22 | – | – | |
| Phobius | 94 | 104 | 11 | – | – | |
| Phobius | 105 | 125 | 21 | – | – | |
| TMHMM | 108 | 130 | 23 | – | – | |
| Phobius | 126 | 136 | 11 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 137 | 157 | 21 | – | – | |
| Phobius | 158 | 475 | 318 | – | – | |
| PANTHER | 455 | 576 | 122 | 7.10E-202 | – | |
| PANTHER | 455 | 576 | 122 | 7.10E-202 | – | |
| SUPERFAMILY | 459 | 570 | 112 | 9.81E-43 | ||
| Pfam | 460 | 568 | 109 | 4.50E-14 | ||
| Phobius | 476 | 499 | 24 | – | – | |
| Gene3D | 478 | 570 | 93 | 9.00E-06 | – | |
| Phobius | 500 | 518 | 19 | – | – | |
| TMHMM | 519 | 541 | 23 | – | – | |
| Phobius | 519 | 541 | 23 | – | – | |
| ProSitePatterns | 541 | 558 | 18 | – | ||
| Phobius | 542 | 552 | 11 | – | – | |
| TMHMM | 553 | 575 | 23 | – | – | |
| Phobius | 553 | 574 | 22 | – | – | |
| Phobius | 575 | 576 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0317779.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0317779.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.