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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0318659 |
| Transcript ID | Lj0g3v0318659.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Calcium-transporting ATPase 4, plasma membrane-type [Medicago truncatula] gi|357515761|ref|XP_003628169.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 227 | 227 | 1.00E-70 | ||
| Phobius | 1 | 29 | 29 | – | – | |
| PANTHER | 1 | 101 | 101 | 2.50E-126 | – | |
| PANTHER | 1 | 101 | 101 | 2.50E-126 | – | |
| SUPERFAMILY | 15 | 227 | 213 | 1.11E-48 | – | |
| TMHMM | 25 | 47 | 23 | – | – | |
| Phobius | 30 | 50 | 21 | – | – | |
| Pfam | 50 | 223 | 174 | 1.00E-38 | ||
| Phobius | 51 | 55 | 5 | – | – | |
| TMHMM | 52 | 74 | 23 | – | – | |
| Phobius | 56 | 74 | 19 | – | – | |
| Phobius | 75 | 169 | 95 | – | – | |
| PANTHER | 117 | 242 | 126 | 2.50E-126 | – | |
| PANTHER | 117 | 242 | 126 | 2.50E-126 | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 170 | 191 | 22 | – | – | |
| Phobius | 192 | 202 | 11 | – | – | |
| Phobius | 203 | 221 | 19 | – | – | |
| TMHMM | 204 | 226 | 23 | – | – | |
| Phobius | 222 | 244 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0318659.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0318659.2, powered by CORGI.
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