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Lj0g3v0327969.1

Overview

Field Value
Gene ID Lj0g3v0327969
Transcript ID Lj0g3v0327969.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: histidine kinase 3-like [Glycine max] gi|356512385|ref|XP_003524900.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.2300
1 128 128 1.10E-04 –
SUPERFAMILY
SSF52172
2 126 125 3.13E-07
IPR011006
PANTHER
PTHR24423:SF381
31 188 158 2.60E-53 –
PANTHER
PTHR24423
31 188 158 2.60E-53 –
CDD
cd06223
104 178 75 0.00200963
IPR000836
Gene3D
G3DSA:3.40.50.2300
148 186 39 5.50E-08 –
SUPERFAMILY
SSF52172
148 186 39 1.35E-07
IPR011006
ProSiteProfiles
PS50110
150 188 39 14.851
IPR001789

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000160
Biological process Phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj0g3v0327969.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0327969.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.